[←][→] ath   AT2G25170 Gene
functional annotation
Function   chromatin remodeling factor CHD3 (PICKLE)  
GO BP
GO:2000023 [list] [network] regulation of lateral root development  (11 genes)  IMP  
GO:0006338 [list] [network] chromatin remodeling  (51 genes)  ISS  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (54 genes)  IMP  
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (66 genes)  IMP  
GO:0009739 [list] [network] response to gibberellin  (154 genes)  IMP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IMP  
GO:0051301 [list] [network] cell division  (352 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003678 [list] [network] DNA helicase activity  (34 genes)  ISS  
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0016887 [list] [network] ATPase activity  (507 genes)  ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001324291.1  NP_001324292.1  NP_001324293.1  NP_565587.1 
BLAST NP_001324291.1  NP_001324292.1  NP_001324293.1  NP_565587.1 
Orthologous [Ortholog page] LOC7458410 (ppo)  LOC9268973 (osa)  LOC11436035 (mtr)  LOC25481959 (mtr)  LOC100261114 (vvi)  LOC100779829 (gma)  LOC100790230 (gma)  LOC100804203 (gma)  LOC101263831 (sly)  LOC101268002 (sly)  LOC103637982 (zma)  LOC103842207 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for NP_001324291.1)
cyto 5,  chlo 1,  nucl 1,  mito 1,  plas 1,  E.R. 1,  cysk_nucl 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001324292.1)
chlo 4,  extr 2,  vacu 1,  nucl 1,  cysk_nucl 1,  cyto 1,  plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_001324293.1)
cyto 6,  nucl 2,  chlo 1  (predict for NP_565587.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001324291.1)
mito 4  (predict for NP_001324292.1)
scret 8,  mito 3  (predict for NP_001324293.1)
other 8,  mito 5  (predict for NP_565587.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PKL on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.3 AT5G47690 binding protein [detail] 834820
9.3 LINC3 little nuclei3 [detail] 843210
8.8 AT3G54760 dentin sialophosphoprotein-like protein [detail] 824641
7.4 SCC3 sister-chromatid cohesion protein 3 [detail] 819410
7.2 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein [detail] 823849
6.8 AT4G00990 Transcription factor jumonji (jmjC) domain-containing protein [detail] 827933
5.7 UBP15 ubiquitin-specific protease 15 [detail] 838281
5.6 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component [detail] 823458
4.5 DML1 demeter-like 1 [detail] 818224
Coexpressed
gene list		 [Coexpressed gene list for PKL]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264384_at
264384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264384_at
264384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264384_at
264384_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817055      
Refseq ID (protein) NP_001324291.1 
NP_001324292.1 
NP_001324293.1 
NP_565587.1 


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