[←][→] ath   At2g26000 Gene
functional annotation
Function   zinc finger (C3HC4-type RING finger) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (189 genes)  IC  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (35 genes)  IDA  
GO:0046982 [list] [network] protein heterodimerization activity  (97 genes)  IDA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001031419.1  NP_001323647.1  NP_180170.2 
BLAST NP_001031419.1  NP_001323647.1  NP_180170.2 
Orthologous [Ortholog page] BRIZ1 (ath)  LOC4328521 (osa)  LOC4337211 (osa)  LOC7459882 (ppo)  LOC7462582 (ppo)  LOC11427211 (mtr)  LOC11441671 (mtr)  LOC18099159 (ppo)  LOC100794688 (gma)  LOC100805696 (gma)  LOC100807397 (gma)  LOC101244783 (sly)  LOC101253672 (sly)  LOC103853241 (bra)  LOC103873739 (bra)  LOC123047128 (tae)  LOC123054941 (tae)  LOC123132454 (tae)  LOC123136528 (tae)  LOC123144032 (tae)  LOC123190791 (tae)  LOC123402926 (hvu)  LOC123428156 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  extr 1,  vacu 1  (predict for NP_001031419.1)
nucl 6,  cyto 2,  chlo 1,  extr 1,  vacu 1  (predict for NP_001323647.1)
nucl 7,  cyto 1,  chlo 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_180170.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001031419.1)
chlo 8  (predict for NP_001323647.1)
chlo 8  (predict for NP_180170.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with BRIZ2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT5G37340 ZPR1 zinc-finger domain protein [detail] 833708
6.7 AT3G09360 Cyclin/Brf1-like TBP-binding protein [detail] 820092
6.3 ADA2A ADA2 2A [detail] 819965
6.1 AT5G22820 ARM repeat superfamily protein [detail] 832345
5.9 AT2G27790 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817326
Coexpressed
gene list		 [Coexpressed gene list for BRIZ2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266836_at
266836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266836_at
266836_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266836_at
266836_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817141      
Refseq ID (protein) NP_001031419.1 
NP_001323647.1 
NP_180170.2 


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