[←][→] ath   AT2G27170 Gene
functional annotation
Function   Structural maintenance of chromosomes (SMC) family protein  
GO BP
GO:0007062 [list] [network] sister chromatid cohesion  (35 genes)  IMP  
GO:0007059 [list] [network] chromosome segregation  (108 genes)  IMP  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IEA  
GO:0051301 [list] [network] cell division  (352 genes)  IEA  
GO CC
GO:0008278 [list] [network] cohesin complex  (8 genes)  ISS  
GO:0016363 [list] [network] nuclear matrix  (9 genes)  IDA  
GO:0000775 [list] [network] chromosome, centromeric region  (55 genes)  IEA  
GO:0005819 [list] [network] spindle  (82 genes)  IDA  
GO:0000785 [list] [network] chromatin  (160 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0003682 [list] [network] chromatin binding  (126 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001077968.1  NP_001324367.1  NP_001324368.1  NP_180285.4 
BLAST NP_001077968.1  NP_001324367.1  NP_001324368.1  NP_180285.4 
Orthologous [Ortholog page] LOC4328210 (osa)  LOC7460108 (ppo)  LOC9269307 (osa)  LOC25483349 (mtr)  LOC100125911 (sly)  LOC100257283 (vvi)  LOC100779503 (gma)  LOC100810448 (gma)  LOC103630807 (zma)  LOC103858330 (bra)  LOC103864758 (bra) 
Subcellular
localization
wolf
cyto 9,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001077968.1)
cyto 8,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for NP_001324367.1)
cyto 8,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for NP_001324368.1)
cyto 9,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_180285.4)
Subcellular
localization
TargetP
other 7  (predict for NP_001077968.1)
other 7  (predict for NP_001324367.1)
other 7  (predict for NP_001324368.1)
other 7  (predict for NP_180285.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with TTN7 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.6 AT2G33435 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817909
10.6 AT5G47690 binding protein [detail] 834820
10.5 TTN8 Structural maintenance of chromosomes (SMC) family protein [detail] 824632
10.1 PIE1 SNF2 domain-containing protein / helicase domain-containing protein [detail] 820463
9.3 AT1G02990 hypothetical protein [detail] 839380
7.2 HAT3.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein [detail] 821485
6.0 TOP6B topoisomerase 6 subunit B [detail] 821626
Coexpressed
gene list		 [Coexpressed gene list for TTN7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263569_at
263569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263569_at
263569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263569_at
263569_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817259      
Refseq ID (protein) NP_001077968.1 
NP_001324367.1 
NP_001324368.1 
NP_180285.4 


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