[←][→] ath   At2g27285 Gene
functional annotation
Function   nuclear speckle splicing regulatory-like protein (DUF2040)      
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (8 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_565644.1 
BLAST NP_565644.1 
Orthologous [Ortholog page] AT2G27280 (ath)  AT1G55928 (ath)  LOC4335927 (osa)  LOC7474913 (ppo)  LOC11442499 (mtr)  LOC100776722 (gma)  LOC100809279 (gma)  LOC101245227 (sly)  LOC103864772 (bra)  LOC123045533 (tae)  LOC123053377 (tae)  LOC123189287 (tae)  LOC123408258 (hvu)  LOC123426788 (hvu)  LOC123439760 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  cysk 1  (predict for NP_565644.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_565644.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT2G27285 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.6 AT2G16860 GCIP-interacting family protein [detail] 816187
8.6 AT3G62140 NEFA-interacting nuclear protein [detail] 825387
8.3 AT5G53800 nucleic acid-binding protein [detail] 835461
8.3 SMP2 Pre-mRNA splicing Prp18-interacting factor [detail] 829866
8.0 CUL3B cullin 3B [detail] 843303
7.9 TPR1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829171
7.6 RAP74 transcription initiation factor IIF subunit alpha RAP74 [detail] 826874
7.2 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein [detail] 817020
7.1 AT5G59210 myosin heavy chain-like protein [detail] 836039
6.0 AT2G17350 beta-mannosyltransferase-like protein [detail] 816242
5.2 AT2G17990 polyamine-modulated factor 1-binding protein [detail] 816311
Coexpressed
gene list		 [Coexpressed gene list for AT2G27285]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265627_at
265627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265627_at
265627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265627_at
265627_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817271      
Refseq ID (protein) NP_565644.1 


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