[][] ath   AT2G27980 Gene
functional annotation
Function   Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
GO:0003682 [list] [network] chromatin binding  (126 genes)  IBA  
GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding  (152 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IBA  
KEGG
Protein NP_180365.6 
BLAST NP_180365.6 
Orthologous [Ortholog page] AT2G36720 (ath)LOC4342152 (osa)LOC7496384 (ppo)LOC11427165 (mtr)LOC25483909 (mtr)LOC100255152 (vvi)LOC100260233 (vvi)LOC100798276 (gma)LOC100802562 (gma)LOC100803825 (gma)LOC100804381 (gma)LOC101246881 (sly)LOC101254125 (sly)LOC101264398 (sly)LOC103626499 (zma)LOC103829696 (bra)LOC103864815 (bra)LOC103865556 (bra)
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  nucl_plas 2  (predict for NP_180365.6)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_180365.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT2G27980 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.5 AT2G33435 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817909
7.4 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [detail] 818244
7.2 AT5G22760 PHD finger family protein [detail] 832339
6.1 AT2G04865 Aminotransferase-like, plant mobile domain family protein [detail] 815033
5.5 AT3G08020 PHD finger family protein [detail] 819993
5.0 FRS10 FAR1-related sequence 10 [detail] 832948
Coexpressed
gene list
[Coexpressed gene list for AT2G27980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264060_at
264060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264060_at
264060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
264060_at
264060_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817342    
Refseq ID (protein) NP_180365.6 


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