[←][→] ath   At2g29390 Gene
functional annotation
Function   sterol 4-alpha-methyl-oxidase 2-2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0080065 [list] [network] 4-alpha-methyl-delta7-sterol oxidation  (2 genes)  IGI  
GO:0016126 [list] [network] sterol biosynthetic process  (23 genes)  IGI  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (108 genes)  IDA  
GO:0016020 [list] [network] membrane  (3629 genes)  TAS  
GO MF
GO:0000254 [list] [network] C-4 methylsterol oxidase activity  (4 genes)  IGI  
KEGG ath00100 [list] [network] Steroid biosynthesis (36 genes)
Protein NP_001077974.1  NP_001077975.1  NP_001318311.1  NP_565681.1  NP_850133.1  NP_973559.1 
BLAST NP_001077974.1  NP_001077975.1  NP_001318311.1  NP_565681.1  NP_850133.1  NP_973559.1 
Orthologous [Ortholog page] SMO2-1 (ath)  LOC4342171 (osa)  LOC4351226 (osa)  LOC7481517 (ppo)  LOC7485682 (ppo)  LOC11407532 (mtr)  LOC11410003 (mtr)  LOC25496266 (mtr)  LOC100736533 (sly)  LOC100790183 (gma)  LOC100816716 (gma)  SMO4 (sly)  LOC103836444 (bra)  LOC103843947 (bra)  LOC103864965 (bra)  LOC120575921 (mtr)  LOC123086313 (tae)  LOC123091749 (tae)  LOC123096733 (tae)  LOC123448236 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_E.R. 2,  mito 1,  extr 1,  pero 1,  cysk 1  (predict for NP_001077974.1)
chlo 8,  cyto 1  (predict for NP_001077975.1)
cyto 4,  chlo 3,  cyto_E.R. 2,  mito 1,  extr 1,  pero 1,  cysk 1  (predict for NP_001318311.1)
cyto 8,  cyto_E.R. 4,  nucl 1,  extr 1  (predict for NP_565681.1)
cyto 7,  cyto_E.R. 4,  chlo 1,  nucl 1,  extr 1  (predict for NP_850133.1)
chlo 6,  cyto 2,  nucl 1,  extr 1  (predict for NP_973559.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for NP_001077974.1)
other 8  (predict for NP_001077975.1)
other 5,  scret 3  (predict for NP_001318311.1)
other 7,  scret 6  (predict for NP_565681.1)
other 7,  scret 6  (predict for NP_850133.1)
scret 8  (predict for NP_973559.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 3
ath00900 Terpenoid backbone biosynthesis 2
Genes directly connected with SMO2-2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 STE1 sterol 1 [detail] 820679
6.2 FPS2 farnesyl diphosphate synthase 2 [detail] 827430
5.7 AT1G64650 Major facilitator superfamily protein [detail] 842773
Coexpressed
gene list		 [Coexpressed gene list for SMO2-2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266289_at
266289_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266289_at
266289_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266289_at
266289_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817488      
Refseq ID (protein) NP_001077974.1 
NP_001077975.1 
NP_001318311.1 
NP_565681.1 
NP_850133.1 
NP_973559.1 


The preparation time of this page was 0.1 [sec].