[←][→] ath   At2g29890 Gene
functional annotation
Function   villin-like 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051014 [list] [network] actin filament severing  (3 genes)  IDA IEA  
GO:0051016 [list] [network] barbed-end actin filament capping  (4 genes)  IDA  
GO:0030835 [list] [network] negative regulation of actin filament depolymerization  (9 genes)  IDA  
GO:0030042 [list] [network] actin filament depolymerization  (12 genes)  IDA  
GO:0045010 [list] [network] actin nucleation  (20 genes)  IDA  
GO:0007015 [list] [network] actin filament organization  (70 genes)  IDA  
GO CC
GO:0015629 [list] [network] actin cytoskeleton  (37 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0051015 [list] [network] actin filament binding  (39 genes)  IDA IEA  
GO:0003779 [list] [network] actin binding  (70 genes)  IDA  
KEGG
Protein NP_001031444.2  NP_001189635.1  NP_001324173.1  NP_001324174.1  NP_029567.1 
BLAST NP_001031444.2  NP_001189635.1  NP_001324173.1  NP_001324174.1  NP_029567.1 
Orthologous [Ortholog page] LOC4337837 (osa)  LOC7468566 (ppo)  LOC25490850 (mtr)  LOC100787896 (gma)  LOC100790323 (gma)  LOC103868003 (bra)  LOC123113018 (tae)  LOC123180541 (tae)  LOC123191485 (tae)  LOC123425683 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001031444.2)
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for NP_001189635.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_001324173.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_001324174.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_029567.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001031444.2)
other 7  (predict for NP_001189635.1)
other 7  (predict for NP_001324173.1)
other 7  (predict for NP_001324174.1)
other 7  (predict for NP_029567.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03430 Mismatch repair 2
Genes directly connected with VLN1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 ANT Integrase-type DNA-binding superfamily protein [detail] 829931
5.9 VIIIB P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 828845
5.4 TOP3A topoisomerase 3alpha [detail] 836513
Coexpressed
gene list		 [Coexpressed gene list for VLN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263485_at
263485_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263485_at
263485_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263485_at
263485_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817539      
Refseq ID (protein) NP_001031444.2 
NP_001189635.1 
NP_001324173.1 
NP_001324174.1 
NP_029567.1 


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