ATTED-II : GeneID search result

[←][→] ath AT2G30620 Gene

functional annotation

Function

winged-helix DNA-binding transcription factor family protein

GO BP

GO:0006334 [list] [network] nucleosome assembly

(34 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome	(45 genes)	IEA
GO:0005730 [list] [network] nucleolus	(477 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001189643.1 NP_180620.1

BLAST

NP_001189643.1 NP_180620.1

Orthologous

[Ortholog page] LOC542385 (zma) H1 (sly) LOC4334439 (osa) LOC7460433 (ppo) LOC7474614 (ppo) LOC7479991 (ppo) LOC7492435 (ppo) LOC25484327 (mtr) LOC25484335 (mtr) LOC25484336 (mtr) LOC25484627 (mtr) LOC25499208 (mtr) LOC25501631 (mtr) LOC100245167 (vvi) LOC100247613 (vvi) LOC100251147 (vvi) LOC100306187 (gma) LOC100382582 (zma) LOC100775944 (gma) LOC100785055 (gma) LOC100795994 (gma) LOC100810590 (gma) LOC101245495 (sly) LOC103625810 (zma) LOC103844013 (bra) LOC103857332 (bra) LOC103865059 (bra)

Subcellular
localization
wolf

nucl 9, chlo 1, mito 1, chlo_mito 1	(predict for NP_001189643.1)
nucl 7, cyto 1, chlo 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_180620.1)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for NP_001189643.1)
other 8, chlo 3	(predict for NP_180620.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT2G30620 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
17.2	AT1G06760	winged-helix DNA-binding transcription factor family protein	[detail]	837187
10.2	AT3G53730	Histone superfamily protein	[detail]	824540
9.3	AT4G40040	Histone superfamily protein	[detail]	830165
7.3	AT2G28720	Histone superfamily protein	[detail]	817421
7.3	HON4	winged-helix DNA-binding transcription factor family protein	[detail]	821328

Coexpressed
gene list

[Coexpressed gene list for AT2G30620]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

267492_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

267492_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

267492_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	817612
Refseq ID (protein)	NP_001189643.1
Refseq ID (protein)	NP_180620.1

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