[←][→] ath   At2g30780 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO:0044085 [list] [network] cellular component biogenesis  (1358 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001324795.1  NP_180636.1 
BLAST NP_001324795.1  NP_180636.1 
Orthologous [Ortholog page] AT2G48000 (ath)  LOC4338765 (osa)  LOC7460365 (ppo)  LOC11418299 (mtr)  LOC11436413 (mtr)  LOC100792116 (gma)  LOC100816768 (gma)  LOC101266044 (sly)  LOC103865071 (bra)  LOC123441379 (hvu) 
Subcellular
localization
wolf
chlo 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001324795.1)
chlo 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_180636.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001324795.1)
mito 5  (predict for NP_180636.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G30780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838903
7.1 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 822114
7.0 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein [detail] 815153
4.8 AT4G21890 zinc finger MYND domain protein [detail] 828278
Coexpressed
gene list		 [Coexpressed gene list for AT2G30780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267568_at
267568_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267568_at
267568_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267568_at
267568_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817629      
Refseq ID (protein) NP_001324795.1 
NP_180636.1 


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