[←][→] ath   AT2G31970 Gene
functional annotation
Function   DNA repair-recombination protein (RAD50)  
GO BP
GO:0000722 [list] [network] telomere maintenance via recombination  (2 genes)  IBA  
GO:0006312 [list] [network] mitotic recombination  (10 genes)  IMP  
GO:0016233 [list] [network] telomere capping  (10 genes)  IBA IMP  
GO:0007004 [list] [network] telomere maintenance via telomerase  (11 genes)  IBA  
GO:0032508 [list] [network] DNA duplex unwinding  (29 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IMP  
GO:0070192 [list] [network] chromosome organization involved in meiotic cell cycle  (50 genes)  IBA  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IMP  
GO CC
GO:0030870 [list] [network] Mre11 complex  (3 genes)  IBA TAS  
GO:0035861 [list] [network] site of double-strand break  (6 genes)  IBA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0000794 [list] [network] condensed nuclear chromosome  (28 genes)  IBA  
GO:0000790 [list] [network] nuclear chromatin  (80 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0051880 [list] [network] G-quadruplex DNA binding  (1 genes)  IBA  
GO:0003691 [list] [network] double-stranded telomeric DNA binding  (6 genes)  IBA  
GO:0000014 [list] [network] single-stranded DNA endodeoxyribonuclease activity  (9 genes)  IBA  
GO:0004017 [list] [network] adenylate kinase activity  (9 genes)  IBA  
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (11 genes)  IBA  
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IBA  
GO:0016887 [list] [network] ATPase activity  (507 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
ath03450 [list] [network] Non-homologous end-joining (8 genes)
Protein NP_565733.1 
BLAST NP_565733.1 
Orthologous [Ortholog page] LOC4329409 (osa)  LOC7495838 (ppo)  LOC11435676 (mtr)  LOC100243413 (vvi)  LOC100818545 (gma)  LOC101256382 (sly)  LOC103653563 (zma)  LOC103857408 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  mito 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for NP_565733.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565733.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03450 Non-homologous end-joining 2
Genes directly connected with RAD50 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.2 AT1G67120 midasin-like protein [detail] 843032
10.1 NUA nuclear pore anchor [detail] 844268
9.2 CIP4.1 COP1-interacting protein 4.1 [detail] 827980
6.8 GLE1 nucleoporin GLE1-like protein [detail] 837869
6.8 PMS1 DNA mismatch repair protein [detail] 827997
6.3 ATLIG4 DNA ligase IV [detail] 835822
5.7 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833737
Coexpressed
gene list		 [Coexpressed gene list for RAD50]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265678_at
265678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265678_at
265678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265678_at
265678_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817756      
Refseq ID (protein) NP_565733.1 


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