[←][→] ath   AT2G33730 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein  
GO BP
GO:1903800 [list] [network] positive regulation of production of miRNAs involved in gene silencing by miRNA  (3 genes)  IMP  
GO:2000636 [list] [network] positive regulation of primary miRNA processing  (3 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA IMP  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0140223 [list] [network] general transcription initiation factor activity  (9 genes)  IMP  
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_180929.1 
BLAST NP_180929.1 
Orthologous [Ortholog page] LOC4333866 (osa)  LOC11430254 (mtr)  LOC25494333 (mtr)  LOC100241918 (vvi)  LOC100263263 (vvi)  LOC100281521 (zma)  LOC100286176 (zma)  LOC100792810 (gma)  LOC100799264 (gma)  LOC101245423 (sly)  LOC101267079 (sly)  LOC103865293 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for NP_180929.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_180929.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
Genes directly connected with AT2G33730 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT1G10580 Transducin/WD40 repeat-like superfamily protein [detail] 837599
7.5 AT3G26560 ATP-dependent RNA helicase [detail] 822264
7.3 AT1G28060 Pre-mRNA-splicing factor 3 [detail] 839699
6.7 AT4G11160 Translation initiation factor 2, small GTP-binding protein [detail] 826717
Coexpressed
gene list		 [Coexpressed gene list for AT2G33730]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267454_at
267454_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267454_at
267454_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267454_at
267454_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 817938      
Refseq ID (protein) NP_180929.1 


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