| functional annotation |
| Function |
transducin family protein / WD-40 repeat family protein |
|
| GO BP |
|
GO:0009855 [list] [network] determination of bilateral symmetry
|
(6 genes)
|
IMP
|
 |
|
GO:0080186 [list] [network] developmental vegetative growth
|
(10 genes)
|
IMP
|
|
|
GO:0010197 [list] [network] polar nucleus fusion
|
(31 genes)
|
IMP
|
|
|
GO:0009960 [list] [network] endosperm development
|
(34 genes)
|
IMP
|
|
|
GO:0009553 [list] [network] embryo sac development
|
(146 genes)
|
IMP
|
|
|
GO:0006364 [list] [network] rRNA processing
|
(276 genes)
|
IBA
|
|
|
GO:0009793 [list] [network] embryo development ending in seed dormancy
|
(547 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_565782.1
NP_973596.1
|
| BLAST |
NP_565782.1
NP_973596.1
|
| Orthologous |
[Ortholog page]
LOC4344178 (osa)
LOC7456844 (ppo)
LOC11438101 (mtr)
LOC25492893 (mtr)
LOC100193903 (zma)
LOC100241888 (vvi)
LOC100260046 (vvi)
LOC100777451 (gma)
LOC100792826 (gma)
LOC100820220 (gma)
LOC101265597 (sly)
LOC103865324 (bra)
LOC103867469 (bra)
|
Subcellular
localization
wolf |
|
cysk 5,
cyto 3,
nucl 1,
cyto_pero 1,
cyto_plas 1
|
(predict for NP_565782.1)
|
|
cyto 4,
nucl 2,
cysk 1,
golg 1,
chlo 1,
extr 1,
golg_plas 1,
cysk_plas 1
|
(predict for NP_973596.1)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_565782.1)
|
|
scret 8
|
(predict for NP_973596.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03008 |
Ribosome biogenesis in eukaryotes |
4 |
 |
| ath03018 |
RNA degradation |
3 |
 |
| ath03040 |
Spliceosome |
2 |
 |
Genes directly connected with WDR55 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 12.4 |
AT4G04940 |
transducin family protein / WD-40 repeat family protein |
[detail] |
825833 |
| 11.8 |
AT2G25355 |
PNAS-3-like protein |
[detail] |
817074 |
| 11.7 |
AT3G06530 |
ARM repeat superfamily protein |
[detail] |
819831 |
| 11.4 |
RBL |
Noc2p family |
[detail] |
824716 |
| 10.9 |
AT2G19540 |
Transducin family protein / WD-40 repeat family protein |
[detail] |
816473 |
| 9.8 |
AT3G46210 |
Ribosomal protein S5 domain 2-like superfamily protein |
[detail] |
823766 |
| 9.7 |
AT5G38890 |
Nucleic acid-binding, OB-fold-like protein |
[detail] |
833880 |
| 9.4 |
AT2G41670 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
818765 |
| 9.1 |
AT1G51380 |
DEA(D/H)-box RNA helicase family protein |
[detail] |
841562 |
| 9.0 |
AT5G20160 |
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
[detail] |
832138 |
| 9.0 |
AT5G51540 |
Zincin-like metalloproteases family protein |
[detail] |
835228 |
| 8.9 |
AT3G55605 |
Mitochondrial glycoprotein family protein |
[detail] |
824726 |
| 8.6 |
AT3G15460 |
Ribosomal RNA processing Brix domain protein |
[detail] |
820785 |
| 7.8 |
AT5G14600 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
831312 |
| 7.7 |
AT5G05990 |
Mitochondrial glycoprotein family protein |
[detail] |
830486 |
| 7.6 |
OSB4 |
organellar single-stranded DNA binding protein 4 |
[detail] |
839987 |
|
Coexpressed
gene list |
[Coexpressed gene list for WDR55]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
267004_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
267004_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
267004_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT2G34260 Gene
