[←][→] ath   AT2G36990 Gene
functional annotation
Function   RNApolymerase sigma-subunit F  
GO BP
GO:0071483 [list] [network] cellular response to blue light  (27 genes)  IEP  
GO:0006352 [list] [network] DNA-templated transcription, initiation  (56 genes)  TAS  
GO:0090351 [list] [network] seedling development  (115 genes)  IMP  
GO:0071482 [list] [network] cellular response to light stimulus  (131 genes)  IMP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0016987 [list] [network] sigma factor activity  (6 genes)  IDA IMP ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_565856.1 
BLAST NP_565856.1 
Orthologous [Ortholog page] LOC542484 (zma)  LOC4345044 (osa)  LOC11432370 (mtr)  LOC11434136 (mtr)  LOC100267110 (vvi)  LOC100306289 (gma)  LOC100778636 (gma)  LOC100782822 (gma)  LOC100793539 (gma)  LOC100815699 (gma)  LOC101267154 (sly)  LOC103865571 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for NP_565856.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_565856.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
Genes directly connected with SIGF on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 AT3G23700 Nucleic acid-binding proteins superfamily [detail] 821951
8.4 APG3 Peptide chain release factor 1 [detail] 825466
8.4 emb1138 DEAD box RNA helicase (RH3) [detail] 832713
8.0 AT3G56010 transmembrane protein [detail] 824767
7.7 AT1G49380 cytochrome c biogenesis protein family [detail] 841361
6.0 NACA2 nascent polypeptide-associated complex subunit alpha-like protein 2 [detail] 824109
5.1 LIP2 lipoyltransferase 2 [detail] 839462
Coexpressed
gene list		 [Coexpressed gene list for SIGF]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263846_at
263846_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263846_at
263846_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263846_at
263846_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818273      
Refseq ID (protein) NP_565856.1 


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