[←][→] ath   AT2G38020 Gene
functional annotation
Function   vacuoleless1 (VCL1)  
GO BP
GO:0032889 [list] [network] regulation of vacuole fusion, non-autophagic  (1 genes)  IBA  
GO:0035542 [list] [network] regulation of SNARE complex assembly  (4 genes)  IBA  
GO:0016197 [list] [network] endosomal transport  (49 genes)  IBA  
GO:0007033 [list] [network] vacuole organization  (54 genes)  TAS  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IEA  
GO CC
GO:0033263 [list] [network] CORVET complex  (4 genes)  IDA  
GO:0030897 [list] [network] HOPS complex  (7 genes)  IBA IDA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IEA  
GO:0009705 [list] [network] plant-type vacuole membrane  (124 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  HDA  
GO:0032991 [list] [network] protein-containing complex  (2638 genes)  IPI  
GO MF
GO:0003779 [list] [network] actin binding  (98 genes)  IBA  
KEGG
Protein NP_001078020.1  NP_565879.1 
BLAST NP_001078020.1  NP_565879.1 
Orthologous [Ortholog page] LOC4326864 (osa)  LOC7468728 (ppo)  LOC11407131 (mtr)  LOC25480137 (mtr)  LOC100260824 (vvi)  LOC100812079 (gma)  LOC100817661 (gma)  LOC101250423 (sly)  LOC103636149 (zma)  LOC103857755 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  vacu 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001078020.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_565879.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001078020.1)
other 6  (predict for NP_565879.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03060 Protein export 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with VCL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 ATSAC1 Phosphoinositide phosphatase family protein [detail] 838868
6.6 ATERDJ2A DnaJ / Sec63 Brl domains-containing protein [detail] 844334
6.5 ATVPS33 Sec1/munc18-like (SM) proteins superfamily [detail] 824651
Coexpressed
gene list		 [Coexpressed gene list for VCL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266096_at
266096_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266096_at
266096_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266096_at
266096_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818380      
Refseq ID (protein) NP_001078020.1 
NP_565879.1 


The preparation time of this page was 0.2 [sec].