[←][→] ath   AT2G38080 Gene
functional annotation
Function   Laccase/Diphenol oxidase family protein  
GO BP
GO:0046274 [list] [network] lignin catabolic process  (18 genes)  IEA  
GO:0009809 [list] [network] lignin biosynthetic process  (47 genes)  IGI IMP  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (58 genes)  IMP  
GO:0006826 [list] [network] iron ion transport  (59 genes)  IBA  
GO:0055072 [list] [network] iron ion homeostasis  (96 genes)  IBA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA  
GO MF
GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity  (17 genes)  IEA  
GO:0004322 [list] [network] ferroxidase activity  (40 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA IMP  
KEGG
Protein NP_565881.1 
BLAST NP_565881.1 
Orthologous [Ortholog page] LAC10 (ath)  LOC7457267 (ppo)  LOC7466052 (ppo)  LOC7487455 (ppo)  LOC7494473 (ppo)  LOC9269875 (osa)  LOC11406707 (mtr)  LOC11409888 (mtr)  LOC11419201 (mtr)  LOC25490798 (mtr)  LOC100240808 (vvi)  LOC100247392 (vvi)  LOC100267265 (vvi)  LOC100782018 (gma)  LOC100786722 (gma)  LOC100796779 (gma)  LOC100797234 (gma)  LOC100799138 (gma)  LOC101250647 (sly)  LOC101251829 (sly)  LOC101253311 (sly)  LOC103850428 (bra)  LOC103865649 (bra)  LOC103867139 (bra)  LOC103870360 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_565881.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_565881.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with IRX12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
21.2 LAC17 laccase 17 [detail] 836124
20.3 CTL2 chitinase-like protein [detail] 820947
18.1 IRX3 Cellulose synthase family protein [detail] 831608
10.9 LAC2 laccase 2 [detail] 817462
10.6 AT3G27200 Cupredoxin superfamily protein [detail] 822339
Coexpressed
gene list		 [Coexpressed gene list for IRX12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267094_at
267094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267094_at
267094_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267094_at
267094_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818386      
Refseq ID (protein) NP_565881.1 


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