[←][→] ath   At2g39930 Gene
functional annotation
Function   isoamylase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010021 [list] [network] amylopectin biosynthetic process  (7 genes)  IMP  
GO:0005977 [list] [network] glycogen metabolic process  (8 genes)  IDA  
GO:0019252 [list] [network] starch biosynthetic process  (25 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO CC
GO:0010368 [list] [network] chloroplast isoamylase complex  (1 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0019156 [list] [network] isoamylase activity  (3 genes)  IDA IMP  
KEGG ath00500 [list] [network] Starch and sucrose metabolism (172 genes)
Protein NP_001324596.1  NP_001324597.1  NP_181522.1 
BLAST NP_001324596.1  NP_001324597.1  NP_181522.1 
Orthologous [Ortholog page] LOC542884 (tae)  LOC4346068 (osa)  LOC7485483 (ppo)  LOC7490462 (ppo)  LOC11428998 (mtr)  LOC100792587 (gma)  LOC101249741 (sly)  LOC103866998 (bra)  LOC123151415 (tae)  LOC123407337 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_001324596.1)
chlo 6,  pero 1,  nucl 1,  cyto 1,  mito 1,  extr 1,  cyto_nucl 1  (predict for NP_001324597.1)
chlo 7,  nucl 1,  cyto 1,  mito 1,  pero 1,  cyto_nucl 1,  cyto_pero 1  (predict for NP_181522.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001324596.1)
chlo 6  (predict for NP_001324597.1)
chlo 6  (predict for NP_181522.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
Genes directly connected with ISA1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 DBE1 debranching enzyme 1 [detail] 839531
7.1 DPE1 disproportionating enzyme [detail] 836609
6.5 DPE2 disproportionating enzyme 2 [detail] 818682
5.8 AT5G17523 maltose excess-like protein [detail] 6241197
5.6 SS3 starch synthase 3 [detail] 837716
Coexpressed
gene list		 [Coexpressed gene list for ISA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267356_at
267356_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267356_at
267356_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267356_at
267356_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818580      
Refseq ID (protein) NP_001324596.1 
NP_001324597.1 
NP_181522.1 


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