[←][→] ath   AT2G39960 Gene
functional annotation
Function   Microsomal signal peptidase 25 kDa subunit (SPC25)  
GO BP
GO:0006465 [list] [network] signal peptide processing  (15 genes)  IBA  
GO:0045047 [list] [network] protein targeting to ER  (27 genes)  IBA  
GO CC
GO:0005787 [list] [network] signal peptidase complex  (8 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008233 [list] [network] peptidase activity  (526 genes)  IBA  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_181525.2 
BLAST NP_181525.2 
Orthologous [Ortholog page] AT4G04200 (ath)  LOC4329702 (osa)  LOC4335967 (osa)  LOC11415804 (mtr)  LOC100256412 (vvi)  LOC100282505 (zma)  LOC100305648 (gma)  LOC100499695 (gma)  LOC101263503 (sly)  LOC103865756 (bra)  LOC103866994 (bra) 
Subcellular
localization
wolf
plas 5,  E.R. 2,  vacu 1,  golg 1  (predict for NP_181525.2)
Subcellular
localization
TargetP
other 8  (predict for NP_181525.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 6
ath00513 Various types of N-glycan biosynthesis 6
ath04141 Protein processing in endoplasmic reticulum 6
Genes directly connected with AT2G39960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT1G09330 golgi apparatus membrane protein-like protein ECHIDNA protein [detail] 837454
9.1 HAP6 ribophorin II (RPN2) family protein [detail] 827863
8.8 AT3G22845 emp24/gp25L/p24 family/GOLD family protein [detail] 821856
8.2 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 819345
7.8 RTNLB3 Reticulan like protein B3 [detail] 842713
7.1 GLTP1 glycolipid transfer protein 1 [detail] 817912
7.0 AT1G04340 HR-like lesion-inducing protein-like protein [detail] 839547
6.8 PMM phosphomannomutase [detail] 819187
6.3 MSBP1 membrane steroid binding protein 1 [detail] 835300
6.0 VPS26B vacuolar protein sorting 26B [detail] 828883
5.9 AT1G55840 Sec14p-like phosphatidylinositol transfer family protein [detail] 842034
Coexpressed
gene list		 [Coexpressed gene list for AT2G39960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267348_at
267348_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267348_at
267348_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267348_at
267348_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818583      
Refseq ID (protein) NP_181525.2 


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