[←][→] ath   At2g42330 Gene
functional annotation
Function   GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001078041.1  NP_001325005.1  NP_181762.1 
BLAST NP_001078041.1  NP_001325005.1  NP_181762.1 
Orthologous [Ortholog page] STIPL1 (ath)  LOC4352794 (osa)  LOC7459203 (ppo)  LOC7493893 (ppo)  LOC11408066 (mtr)  LOC25500227 (mtr)  LOC100781621 (gma)  LOC100783256 (gma)  LOC101251039 (sly)  LOC103842813 (bra)  LOC123052025 (tae)  LOC123068907 (tae)  LOC123102228 (tae)  LOC123110405 (tae)  LOC123124323 (tae)  LOC123187894 (tae)  LOC123425233 (hvu) 
Subcellular
localization
wolf
cyto 9  (predict for NP_001078041.1)
cyto 9  (predict for NP_001325005.1)
cyto 9  (predict for NP_181762.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078041.1)
other 9  (predict for NP_001325005.1)
other 9  (predict for NP_181762.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT2G42330 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.7 SR34b RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 828027
10.8 AT1G26580 ELM2 domain protein [detail] 839198
10.5 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein [detail] 832631
9.6 AT4G32440 Plant Tudor-like RNA-binding protein [detail] 829379
9.0 AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [detail] 838026
8.8 PAPS2 poly(A) polymerase 2 [detail] 817127
8.5 AT5G63370 Protein kinase superfamily protein [detail] 836456
8.1 AT2G42270 U5 small nuclear ribonucleoprotein helicase [detail] 818828
7.0 nPAP nuclear poly(a) polymerase [detail] 829421
6.9 AT5G61990 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836320
6.6 AT3G45420 Concanavalin A-like lectin protein kinase family protein [detail] 823680
6.5 AT1G62310 transcription factor jumonji (jmjC) domain-containing protein [detail] 842529
6.5 AT5G53150 DnaJ heat shock amino-terminal domain protein [detail] 835396
6.2 AT1G07203 [detail] 28716617
6.1 AT3G02370 tRNA-splicing endonuclease subunit [detail] 821119
5.6 AT4G16680 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 827370
4.1 AT5G58340 myb-like HTH transcriptional regulator family protein [detail] 835946
Coexpressed
gene list		 [Coexpressed gene list for AT2G42330]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265885_at
265885_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265885_at
265885_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265885_at
265885_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818834      
Refseq ID (protein) NP_001078041.1 
NP_001325005.1 
NP_181762.1 


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