[←][→] ath   AT2G42520 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein  
GO BP
GO CC
GO:0043186 [list] [network] P granule  (5 genes)  IBA  
GO:0005777 [list] [network] peroxisome  (325 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001324553.1  NP_001324554.1  NP_181780.1 
BLAST NP_001324553.1  NP_001324554.1  NP_181780.1 
Orthologous [Ortholog page] AT3G58510 (ath)  AT3G58570 (ath)  LOC4334493 (osa)  LOC4342669 (osa)  LOC4350856 (osa)  LOC7457715 (ppo)  LOC7463584 (ppo)  LOC7479507 (ppo)  LOC11427011 (mtr)  LOC11443667 (mtr)  LOC25483582 (mtr)  LOC100240950 (vvi)  LOC100245822 (vvi)  LOC100250155 (vvi)  LOC100250337 (vvi)  LOC100279527 (zma)  LOC100381785 (zma)  LOC100501699 (zma)  LOC100781668 (gma)  LOC100781743 (gma)  LOC100784557 (gma)  LOC100791226 (gma)  LOC100795756 (gma)  LOC100800039 (gma)  LOC100817549 (gma)  LOC100818326 (gma)  LOC101244218 (sly)  LOC101263192 (sly)  LOC103830168 (bra)  LOC103841729 (bra)  LOC103841732 (bra)  LOC103865954 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001324553.1)
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001324554.1)
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_181780.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001324553.1)
chlo 9  (predict for NP_001324554.1)
chlo 9  (predict for NP_181780.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 3
ath03013 RNA transport 2
Genes directly connected with AT2G42520 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.7 AT3G58510 DEA(D/H)-box RNA helicase family protein [detail] 825020
11.3 AT3G58570 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 825026
8.2 TAF15b TBP-associated factor 15B [detail] 835960
6.8 AT1G76140 Prolyl oligopeptidase family protein [detail] 843946
6.2 AT5G63120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836432
5.5 AT4G23040 Ubiquitin-like superfamily protein [detail] 828403
4.7 AT5G16040 Regulator of chromosome condensation (RCC1) family protein [detail] 831461
Coexpressed
gene list		 [Coexpressed gene list for AT2G42520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263493_at
263493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263493_at
263493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263493_at
263493_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818852      
Refseq ID (protein) NP_001324553.1 
NP_001324554.1 
NP_181780.1 


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