ATTED-II : GeneID search result

[←][→] ath AT2G44990 Gene

functional annotation

Function

carotenoid cleavage dioxygenase 7

GO BP

GO:0016124 [list] [network] xanthophyll catabolic process	(3 genes)	IDA
GO:1901601 [list] [network] strigolactone biosynthetic process	(5 genes)	IDA
GO:0016121 [list] [network] carotene catabolic process	(9 genes)	IDA IMP
GO:0010223 [list] [network] secondary shoot formation	(25 genes)	IGI IMP
GO:0009926 [list] [network] auxin polar transport	(66 genes)	IMP
GO:0055114 [list] [network] oxidation-reduction process	(1468 genes)	IEA

GO CC

GO:0009570 [list] [network] chloroplast stroma	(750 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IEA ISM
GO:0009536 [list] [network] plastid	(5519 genes)	IDA

GO MF

GO:0102395 [list] [network] 9-cis-beta-carotene 9',10'-cleavage oxygenase activity	(1 genes)	IEA
GO:0045549 [list] [network] 9-cis-epoxycarotenoid dioxygenase activity	(7 genes)	IDA
GO:0016702 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	(28 genes)	IDA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

ath00906 [list] [network] Carotenoid biosynthesis (29 genes)

Protein

NP_001318427.1 NP_001324720.1 NP_182026.5

BLAST

NP_001318427.1 NP_001324720.1 NP_182026.5

Orthologous

[Ortholog page] LOC4336591 (osa) LOC11438975 (mtr) LOC100242750 (vvi) CCD7 (sly) LOC100502521 (zma) LOC100795056 (gma) CCD7 (gma) LOC103866186 (bra)

Subcellular
localization
wolf

nucl 5, chlo 3, cyto_nucl 3, cysk_nucl 3	(predict for NP_001318427.1)
nucl 4, chlo 4, cyto 1, cysk 1, cyto_mito 1	(predict for NP_001324720.1)
chlo 6, nucl 3, cyto 1, cyto_mito 1	(predict for NP_182026.5)

Subcellular
localization
TargetP

chlo 6	(predict for NP_001318427.1)
chlo 6	(predict for NP_001324720.1)
chlo 6	(predict for NP_182026.5)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for CCD7]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266129_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266129_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266129_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819107
Refseq ID (protein)	NP_001318427.1
	NP_001324720.1
	NP_182026.5

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