[←][→] ath   AT2G47940 Gene
functional annotation
Function   DEGP protease 2  
GO BP
GO:0010206 [list] [network] photosystem II repair  (14 genes)  IDA  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0030163 [list] [network] protein catabolic process  (603 genes)  IMP  
GO:0006508 [list] [network] proteolysis  (901 genes)  IEA  
GO CC
GO:0009533 [list] [network] chloroplast stromal thylakoid  (8 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (93 genes)  IDA  
KEGG
Protein NP_001118544.1  NP_566115.1 
BLAST NP_001118544.1  NP_566115.1 
Orthologous [Ortholog page] LOC7457968 (ppo)  LOC9270258 (osa)  LOC25484786 (mtr)  LOC100251195 (vvi)  LOC100280147 (zma)  LOC100796340 (gma)  LOC100799166 (gma)  LOC101258381 (sly)  LOC101261957 (sly)  LOC103843213 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001118544.1)
chlo 9  (predict for NP_566115.1)
Subcellular
localization
TargetP
chlo 9,  scret 3  (predict for NP_001118544.1)
chlo 8,  scret 3  (predict for NP_566115.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03060 Protein export 2
ath00860 Porphyrin and chlorophyll metabolism 2
Genes directly connected with DEG2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 EMB3126 Ribosomal protein L1p/L10e family [detail] 825524
8.5 ALB1 ALBINA 1 [detail] 837374
8.2 AT3G25660 Amidase family protein [detail] 822154
Coexpressed
gene list		 [Coexpressed gene list for DEG2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266509_at
266509_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266509_at
266509_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266509_at
266509_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819406      
Refseq ID (protein) NP_001118544.1 
NP_566115.1 


The preparation time of this page was 0.2 [sec].