[←][→] ath   At3g02460 Gene
functional annotation
Function   Ypt/Rab-GAP domain of gyp1p superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_001325591.1  NP_001325592.1  NP_001325593.1  NP_566172.1  NP_850503.1 
BLAST NP_001325591.1  NP_001325592.1  NP_001325593.1  NP_566172.1  NP_850503.1 
Orthologous [Ortholog page] PAM1 (ath)  LOC4345560 (osa)  LOC7468375 (ppo)  LOC18107430 (ppo)  LOC25495518 (mtr)  LOC100778662 (gma)  LOC100792187 (gma)  LOC101262565 (sly)  LOC103851015 (bra)  LOC103858958 (bra)  LOC123087236 (tae)  LOC123090723 (tae)  LOC123447208 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_001325591.1)
nucl 5,  chlo 3,  cyto_nucl 3,  nucl_plas 3  (predict for NP_001325592.1)
nucl 6,  chlo 3,  cyto_nucl 3,  cysk_nucl 3  (predict for NP_001325593.1)
nucl 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_566172.1)
nucl 4,  chlo 4,  mito 1  (predict for NP_850503.1)
Subcellular
localization
TargetP
other 4,  mito 3,  chlo 3  (predict for NP_001325591.1)
other 4,  mito 3,  chlo 3  (predict for NP_001325592.1)
other 4,  mito 3,  chlo 3  (predict for NP_001325593.1)
other 4,  mito 3,  chlo 3  (predict for NP_566172.1)
other 4,  mito 3,  chlo 3  (predict for NP_850503.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G02460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT1G10720 BSD domain-containing protein [detail] 837615
6.3 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein [detail] 841466
5.9 AT1G14560 Mitochondrial substrate carrier family protein [detail] 838018
5.8 AT1G28240 strawberry notch protein (DUF616) [detail] 839718
5.4 PAM1 plant adhesion molecule 1 [detail] 831450
5.0 URH1 uridine-ribohydrolase 1 [detail] 818204
Coexpressed
gene list		 [Coexpressed gene list for AT3G02460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258496_at
258496_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258496_at
258496_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258496_at
258496_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821261      
Refseq ID (protein) NP_001325591.1 
NP_001325592.1 
NP_001325593.1 
NP_566172.1 
NP_850503.1 


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