[←][→] ath   At3g02780 Gene
functional annotation
Function   isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0050992 [list] [network] dimethylallyl diphosphate biosynthetic process  (3 genes)  IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IEA TAS  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (163 genes)  TAS  
GO:0009908 [list] [network] flower development  (492 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0004452 [list] [network] isopentenyl-diphosphate delta-isomerase activity  (3 genes)  IDA  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_001325698.1  NP_186927.1 
BLAST NP_001325698.1  NP_186927.1 
Orthologous [Ortholog page] IPP1 (ath)  LOC4338791 (osa)  LOC4343523 (osa)  LOC7455211 (ppo)  LOC11415814 (mtr)  IDI2 (sly)  LOC100192161 (tae)  LOC100783078 (gma)  LOC100789313 (gma)  IDI1 (sly)  LOC103843595 (bra)  LOC103856195 (bra)  LOC103858983 (bra)  LOC103870894 (bra)  LOC123044608 (tae)  LOC123052483 (tae)  LOC123055768 (tae)  LOC123132917 (tae)  LOC123182022 (tae)  LOC123425793 (hvu)  LOC123442975 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_001325698.1)
chlo 10  (predict for NP_186927.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001325698.1)
chlo 8,  mito 3  (predict for NP_186927.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath00240 Pyrimidine metabolism 2
ath01240 Biosynthesis of cofactors 2
ath00270 Cysteine and methionine metabolism 2
Genes directly connected with IPP2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 ATP3 gamma subunit of Mt ATP synthase [detail] 817866
7.9 AT3G03100 NADH:ubiquinone oxidoreductase, 17.2kDa subunit [detail] 821104
6.9 GAMMA CA2 gamma carbonic anhydrase 2 [detail] 841129
6.7 PYR4 pyrimidin 4 [detail] 828392
5.7 ACR12 ACT domain-containing protein [detail] 830352
5.4 AT1G01800 NAD(P)-binding Rossmann-fold superfamily protein [detail] 839259
Coexpressed
gene list		 [Coexpressed gene list for IPP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258619_at
258619_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258619_at
258619_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258619_at
258619_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820960      
Refseq ID (protein) NP_001325698.1 
NP_186927.1 


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