ATTED-II : GeneID search result

[←][→] ath AT3G04090 Gene

functional annotation

Function

small and basic intrinsic protein 1A

GO BP

GO:0006833 [list] [network] water transport	(29 genes)	IGI
GO:0055085 [list] [network] transmembrane transport	(778 genes)	IEA IGI

GO CC

GO:0005789 [list] [network] endoplasmic reticulum membrane	(466 genes)	IEA
GO:0005783 [list] [network] endoplasmic reticulum	(877 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

GO:0015250 [list] [network] water channel activity

(36 genes)

IDA IGI

KEGG

Protein

NP_187059.1

BLAST

NP_187059.1

Orthologous

[Ortholog page] LOC541892 (zma) LOC542494 (zma) SIP1;2 (ath) LOC4325361 (osa) LOC7474650 (ppo) LOC11441026 (mtr) LOC25495873 (mtr) LOC100232979 (vvi) SIP1-2 (gma) SIP1-4 (gma) SIP1-1 (gma) LOC101243965 (sly) SIP1-3 (sly) SIP1-3 (gma) LOC103845845 (bra) LOC103850058 (bra) LOC103855216 (bra)

Subcellular
localization
wolf

vacu 4, cyto 1, plas 1, extr 1, cyto_plas 1

(predict for NP_187059.1)

Subcellular
localization
TargetP

scret 9, other 3

(predict for NP_187059.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SIP1A on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.2	ENT1	equilibrative nucleotide transporter 1	[detail]	843369
6.1	AT5G10780	ER membrane protein complex subunit-like protein	[detail]	830945
6.0	PTR2	peptide transporter 2	[detail]	814735
5.8	TOM2A	tobamovirus multiplication 2A	[detail]	840133

Coexpressed
gene list

[Coexpressed gene list for SIP1A]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258584_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258584_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258584_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819564
Refseq ID (protein)	NP_187059.1

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