[←][→] ath   At3g04820 Gene
functional annotation
Function   Pseudouridine synthase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  TAS  
KEGG
Protein NP_187133.3 
BLAST NP_187133.3 
Orthologous [Ortholog page] LOC4324714 (osa)  LOC9272465 (osa)  LOC11429618 (mtr)  LOC18098950 (ppo)  LOC100780786 (gma)  LOC100795469 (gma)  LOC101266072 (sly)  LOC103859060 (bra)  LOC123061994 (tae)  LOC123062207 (tae)  LOC123079330 (tae)  LOC123139365 (tae)  LOC123182561 (tae)  LOC123444534 (hvu)  LOC123447678 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for NP_187133.3)
Subcellular
localization
TargetP
mito 3,  scret 3  (predict for NP_187133.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT3G04820 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 AT1G06720 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 837182
7.9 AT3G11964 RIBOSOMAL RNA PROCESSING 5 [detail] 820370
7.7 MLH1 MUTL-homologue 1 [detail] 826493
Coexpressed
gene list		 [Coexpressed gene list for AT3G04820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259082_at
259082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259082_at
259082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259082_at
259082_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819642      
Refseq ID (protein) NP_187133.3 


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