[←][→] ath   At3g05090 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010311 [list] [network] lateral root formation  (59 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001325515.1  NP_566246.1  NP_850516.1 
BLAST NP_001325515.1  NP_566246.1  NP_850516.1 
Orthologous [Ortholog page] LOC4351590 (osa)  LOC11433323 (mtr)  LOC18098902 (ppo)  LOC18110960 (ppo)  LOC25484665 (mtr)  LOC100775985 (gma)  LOC100788971 (gma)  LOC100791786 (gma)  LOC100792334 (gma)  LOC101244688 (sly)  LOC101249305 (sly)  LOC103859075 (bra)  LOC103870857 (bra)  LOC123102940 (tae)  LOC123111101 (tae)  LOC123120095 (tae)  LOC123399179 (hvu) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_001325515.1)
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_566246.1)
nucl 4,  chlo 3,  cysk_nucl 3  (predict for NP_850516.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_001325515.1)
other 6,  mito 4  (predict for NP_566246.1)
other 6,  mito 4  (predict for NP_850516.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03015 mRNA surveillance pathway 3
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with LRS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 PP2AA2 protein phosphatase 2A subunit A2 [detail] 822171
6.6 SIZ1 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein [detail] 836163
6.5 TRN1 transportin 1 [detail] 816198
6.0 ETR1 Signal transduction histidine kinase, hybrid-type, ethylene sensor [detail] 842951
5.7 AT3G19895 RING/U-box superfamily protein [detail] 821527
5.1 AT2G27090 bZIP transcription factor (DUF630 and DUF632) [detail] 817251
Coexpressed
gene list		 [Coexpressed gene list for LRS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259313_at
259313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259313_at
259313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259313_at
259313_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819671      
Refseq ID (protein) NP_001325515.1 
NP_566246.1 
NP_850516.1 


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