[←][→] ath   At3g06400 Gene
functional annotation
Function   chromatin-remodeling protein 11  
GO BP
GO:1900036 [list] [network] positive regulation of cellular response to heat  (6 genes)  IMP  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0009561 [list] [network] megagametogenesis  (80 genes)  IMP  
GO:0051510 [list] [network] regulation of unidimensional cell growth  (86 genes)  IMP  
GO:0006338 [list] [network] chromatin remodeling  (106 genes)  IEA  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IGI  
GO CC
GO:0000812 [list] [network] Swr1 complex  (13 genes)  IDA  
GO:0031010 [list] [network] ISWI-type complex  (14 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA IMP ISM  
GO MF
GO:0140750 [list] [network] nucleosome array spacer activity  (2 genes)  IGI  
GO:0043565 [list] [network] sequence-specific DNA binding  (890 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189826.1  NP_001189827.1  NP_187291.2 
BLAST NP_001189826.1  NP_001189827.1  NP_187291.2 
Orthologous [Ortholog page] CHR17 (ath)  LOC4325731 (osa)  LOC4337825 (osa)  LOC7454263 (ppo)  LOC7475383 (ppo)  LOC11441860 (mtr)  LOC18109257 (ppo)  LOC25494064 (mtr)  LOC100782649 (gma)  LOC100791510 (gma)  LOC100809750 (gma)  LOC100814442 (gma)  LOC101245879 (sly)  LOC101267413 (sly)  LOC103845818 (bra)  LOC103849978 (bra)  LOC103854480 (bra)  LOC123060112 (tae)  LOC123068594 (tae)  LOC123077117 (tae)  LOC123112702 (tae)  LOC123180515 (tae)  LOC123191250 (tae)  LOC123425436 (hvu)  LOC123442674 (hvu) 
Subcellular
localization
wolf
cyto 10  (predict for NP_001189826.1)
cyto 10  (predict for NP_001189827.1)
cyto 10  (predict for NP_187291.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001189826.1)
other 8  (predict for NP_001189827.1)
other 8  (predict for NP_187291.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
Genes directly connected with CHR11 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 DOT2 SART-1 family [detail] 831541
8.9 NRPB2 DNA-directed RNA polymerase family protein [detail] 828259
8.8 EMB3011 RNA helicase family protein [detail] 831141
8.6 CUL4 cullin4 [detail] 834663
7.7 SMP1 Pre-mRNA splicing Prp18-interacting factor [detail] 842877
7.6 AT1G02890 AAA-type ATPase family protein [detail] 839507
7.0 TPP2 tripeptidyl peptidase ii [detail] 827833
6.9 AT2G25760 Protein kinase family protein [detail] 817118
Coexpressed
gene list		 [Coexpressed gene list for CHR11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258904_at
258904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258904_at
258904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258904_at
258904_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819814      
Refseq ID (protein) NP_001189826.1 
NP_001189827.1 
NP_187291.2 


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