[←][→] ath   AT3G06400 Gene
functional annotation
Function   chromatin-remodeling protein 11  
GO BP
GO:1900036 [list] [network] positive regulation of cellular response to heat  (3 genes)  IMP  
GO:0016584 [list] [network] nucleosome positioning  (11 genes)  IGI  
GO:0043044 [list] [network] ATP-dependent chromatin remodeling  (18 genes)  IEA  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (36 genes)  IMP  
GO:0034728 [list] [network] nucleosome organization  (48 genes)  IMP  
GO:0051510 [list] [network] regulation of unidimensional cell growth  (69 genes)  IMP  
GO:0009561 [list] [network] megagametogenesis  (72 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IGI  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IMP ISM  
GO MF
GO:0031491 [list] [network] nucleosome binding  (20 genes)  IEA  
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IPI  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001189826.1  NP_001189827.1  NP_187291.2 
BLAST NP_001189826.1  NP_001189827.1  NP_187291.2 
Orthologous [Ortholog page] CHR17 (ath)  LOC4325731 (osa)  LOC4337825 (osa)  LOC7475383 (ppo)  LOC11441860 (mtr)  LOC25494064 (mtr)  LOC100244281 (vvi)  LOC100782649 (gma)  LOC100791510 (gma)  LOC100809750 (gma)  LOC100814442 (gma)  LOC101245879 (sly)  LOC101267413 (sly)  LOC103635205 (zma)  LOC103650180 (zma)  LOC103845818 (bra)  LOC103849978 (bra)  LOC103854480 (bra) 
Subcellular
localization
wolf
cyto 10  (predict for NP_001189826.1)
cyto 10  (predict for NP_001189827.1)
cyto 10  (predict for NP_187291.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001189826.1)
other 8  (predict for NP_001189827.1)
other 8  (predict for NP_187291.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
Genes directly connected with CHR11 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 NRPB2 DNA-directed RNA polymerase family protein [detail] 828259
8.7 DOT2 SART-1 family [detail] 831541
8.6 CDC5 cell division cycle 5 [detail] 837506
7.4 CUL4 cullin4 [detail] 834663
7.4 HMG high mobility group [detail] 822505
7.3 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein [detail] 826760
6.0 AT1G02890 AAA-type ATPase family protein [detail] 839507
Coexpressed
gene list		 [Coexpressed gene list for CHR11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258904_at
258904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258904_at
258904_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258904_at
258904_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819814      
Refseq ID (protein) NP_001189826.1 
NP_001189827.1 
NP_187291.2 


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