[←][→] ath   AT3G06670 Gene
functional annotation
Function   binding protein  
GO BP
GO:0070918 [list] [network] production of small RNA involved in gene silencing by RNA  (52 genes)  IMP  
GO CC
GO:0030289 [list] [network] protein phosphatase 4 complex  (2 genes)  IPI  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0070878 [list] [network] primary miRNA binding  (3 genes)  IDA  
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (113 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001189831.1  NP_187323.2 
BLAST NP_001189831.1  NP_187323.2 
Orthologous [Ortholog page] LOC4326847 (osa)  LOC4337863 (osa)  LOC7482268 (ppo)  LOC11415143 (mtr)  LOC11422056 (mtr)  LOC100241492 (vvi)  LOC100502168 (zma)  LOC100775758 (gma)  LOC100786790 (gma)  LOC100802657 (gma)  LOC100808669 (gma)  LOC101260566 (sly)  LOC101266318 (sly)  LOC103650148 (zma)  LOC103849737 (bra)  LOC103859175 (bra)  LOC103870724 (bra) 
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  cysk 2  (predict for NP_001189831.1)
cyto 4,  nucl 3,  cysk 2,  chlo 1,  nucl_plas 1  (predict for NP_187323.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001189831.1)
other 8  (predict for NP_187323.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G06670 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 MOS1 modifier of snc1 [detail] 828570
8.0 AT1G67580 Protein kinase superfamily protein [detail] 843079
7.7 TAF4 TBP-associated factor 4 [detail] 834330
6.8 GTE8 global transcription factor group E8 [detail] 822345
6.2 ASG2 transducin family protein / WD-40 repeat family protein [detail] 830961
6.0 UPF3 Smg-4/UPF3 family protein [detail] 840295
5.9 AT5G20840 Phosphoinositide phosphatase family protein [detail] 832207
5.9 PEX5 peroxin 5 [detail] 835728
5.8 AT1G04790 RING/U-box superfamily protein [detail] 839412
5.4 AT2G27950 Ring/U-Box superfamily protein [detail] 817339
Coexpressed
gene list		 [Coexpressed gene list for AT3G06670]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258533_at
258533_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258533_at
258533_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258533_at
258533_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819852      
Refseq ID (protein) NP_001189831.1 
NP_187323.2 


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