[←][→] ath   AT3G06770 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_001326102.1  NP_001326103.1  NP_566292.1  NP_850525.1  NP_850526.1 
BLAST NP_001326102.1  NP_001326103.1  NP_566292.1  NP_850525.1  NP_850526.1 
Orthologous [Ortholog page] AT3G16850 (ath)  AT5G49215 (ath)  LOC4351055 (osa)  LOC4352486 (osa)  LOC7477215 (ppo)  LOC11420255 (mtr)  LOC25488046 (mtr)  LOC100191454 (zma)  LOC100241496 (vvi)  LOC100247060 (vvi)  LOC100282607 (zma)  LOC100777503 (gma)  LOC100787190 (gma)  LOC100797678 (gma)  LOC100801823 (gma)  LOC100802343 (gma)  LOC100806574 (gma)  LOC100815184 (gma)  LOC100818007 (gma)  LOC101264974 (sly)  LOC101268765 (sly)  LOC103854580 (bra)  LOC103859180 (bra)  LOC103859685 (bra)  LOC103869730 (bra)  LOC103875025 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3  (predict for NP_001326102.1)
chlo 4,  extr 2,  vacu 2,  chlo_mito 2  (predict for NP_001326103.1)
chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2,  vacu 1,  cysk 1  (predict for NP_566292.1)
chlo 4,  extr 2,  nucl 1,  mito 1,  vacu 1  (predict for NP_850525.1)
chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2,  vacu 1,  cysk 1  (predict for NP_850526.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001326102.1)
scret 8  (predict for NP_001326103.1)
other 5,  mito 3  (predict for NP_566292.1)
scret 8  (predict for NP_850525.1)
other 5,  mito 3  (predict for NP_850526.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G06770 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT2G47440 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819357
7.7 AT3G08600 transmembrane protein, putative (DUF1191) [detail] 820007
7.6 AT3G07470 transmembrane protein, putative (Protein of unknown function, DUF538) [detail] 819935
7.2 BZIP34 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 818839
6.1 AGP26 arabinogalactan protein 26 [detail] 819405
6.1 AT5G49215 Pectin lyase-like superfamily protein [detail] 834981
5.8 AT4G29310 DUF1005 family protein (DUF1005) [detail] 829053
5.3 HERK2 hercules receptor kinase 2 [detail] 839937
5.2 PAR2 phy rapidly regulated 2 [detail] 825054
Coexpressed
gene list		 [Coexpressed gene list for AT3G06770]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258528_at
258528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258528_at
258528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258528_at
258528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819862      
Refseq ID (protein) NP_001326102.1 
NP_001326103.1 
NP_566292.1 
NP_850525.1 
NP_850526.1 


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