ATTED-II : GeneID search result

[←][→] ath At3g07550 Gene

functional annotation

Function

RNI-like superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process

(230 genes)

TAS

GO CC

GO:0005737 [list] [network] cytoplasm

(13880 genes)

ISM

GO MF

KEGG

Protein

NP_001325806.1 NP_566312.1 NP_850534.1

BLAST

NP_001325806.1 NP_566312.1 NP_850534.1

Orthologous

[Ortholog page] LOC4350237 (osa) LOC18103342 (ppo) LOC25500769 (mtr) LOC101253383 (sly) LOC102667402 (gma) LOC103870657 (bra) LOC123086787 (tae) LOC123091185 (tae) LOC123096182 (tae) LOC123447817 (hvu)

Subcellular
localization
wolf

cyto 6, nucl 2, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for NP_001325806.1)
cyto 6, nucl 3	(predict for NP_566312.1)
cyto 6, nucl 3	(predict for NP_850534.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001325806.1)
other 9	(predict for NP_566312.1)
other 9	(predict for NP_850534.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G07550 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.1	AT5G24010	Protein kinase superfamily protein	[detail]	832466
4.6	FBX2	F-box protein 2	[detail]	832228
4.6	AT5G15710	Galactose oxidase/kelch repeat superfamily protein	[detail]	831425

Coexpressed
gene list

[Coexpressed gene list for AT3G07550]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259067_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259067_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259067_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819944
Refseq ID (protein)	NP_001325806.1
	NP_566312.1
	NP_850534.1

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