ATTED-II : GeneID search result

[←][→] ath AT3G07830 Gene

functional annotation

Function

Pectin lyase-like superfamily protein

GO BP

GO:0071555 [list] [network] cell wall organization	(538 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(995 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region

(3363 genes)

IEA ISM

GO MF

GO:0004650 [list] [network] polygalacturonase activity	(52 genes)	IEA
GO:0016829 [list] [network] lyase activity	(412 genes)	IEA

KEGG

Protein

NP_187440.1

BLAST

NP_187440.1

Orthologous

[Ortholog page] LOC542387 (zma) LOC732772 (zma) AT2G15450 (ath) AT2G15460 (ath) AT2G15470 (ath) AT2G26620 (ath) AT2G33160 (ath) AT2G40310 (ath) AT3G07820 (ath) AT3G07840 (ath) AT3G07850 (ath) AT3G14040 (ath) AT4G13760 (ath) AT4G18180 (ath) AT5G48140 (ath) AT1G17150 (ath) AT1G43080 (ath) AT1G43090 (ath) AT1G43100 (ath) AT1G78400 (ath) LOC4323970 (osa) LOC4328617 (osa) LOC4341242 (osa) LOC4341243 (osa) LOC4341514 (osa) LOC4341515 (osa) LOC4345285 (osa) LOC7468605 (ppo) LOC7477987 (ppo) LOC7481681 (ppo) LOC7491350 (ppo) LOC11415149 (mtr) LOC11422898 (mtr) LOC11427911 (mtr) LOC11434881 (mtr) LOC25490499 (mtr) LOC25500883 (mtr) LOC100191230 (zma) LOC100242022 (vvi) LOC100242658 (vvi) LOC100243609 (vvi) LOC100247162 (vvi) LOC100247792 (vvi) LOC100251285 (vvi) LOC100254136 (vvi) LOC100259750 (vvi) LOC100264306 (vvi) LOC100264944 (vvi) LOC100267512 (vvi) LOC100273711 (zma) LOC100273946 (zma) LOC100285881 (zma) LOC100779447 (gma) LOC100779556 (gma) LOC100780097 (gma) LOC100780628 (gma) LOC100784156 (gma) LOC100788863 (gma) LOC100795460 (gma) LOC100810484 (gma) LOC100812594 (gma) LOC100819348 (gma) LOC101244096 (sly) LOC101245486 (sly) LOC101248339 (sly) LOC101248624 (sly) LOC101249384 (sly) LOC101249539 (sly) LOC101268588 (sly) LOC103626843 (zma) LOC103626848 (zma) LOC103629730 (zma) LOC103629733 (zma) LOC103629734 (zma) LOC103629735 (zma) LOC103629743 (zma) LOC103631311 (zma) LOC103639332 (zma) LOC103653359 (zma) LOC103828990 (bra) LOC103831485 (bra) LOC103832320 (bra) LOC103849010 (bra) LOC103849020 (bra) LOC103849039 (bra) LOC103854518 (bra) LOC103857474 (bra) LOC103857926 (bra) LOC103858095 (bra) LOC103858475 (bra) LOC103859243 (bra) LOC103859244 (bra) LOC103859245 (bra) LOC103860974 (bra) LOC103863172 (bra) LOC103865247 (bra) LOC103865787 (bra) MF16 (bra) LOC103872502 (bra) LOC103874929 (bra) LOC109121790 (vvi) LOC109123473 (vvi)

Subcellular
localization
wolf

extr 5, chlo 1, nucl 1, cyto 1, cyto_nucl 1

(predict for NP_187440.1)

Subcellular
localization
TargetP

scret 7

(predict for NP_187440.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT3G07830]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258685_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258685_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258685_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819974
Refseq ID (protein)	NP_187440.1

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