[←][→] ath   At3g07930 Gene
functional annotation
Function   DNA glycosylase superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034605 [list] [network] cellular response to heat  (49 genes)  IMP  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03410 [list] [network] Base excision repair (41 genes)
Protein NP_001327391.1  NP_566325.1  NP_974252.1  NP_974253.1 
BLAST NP_001327391.1  NP_566325.1  NP_974252.1  NP_974253.1 
Orthologous [Ortholog page] LOC4346365 (osa)  LOC7454029 (ppo)  LOC7463420 (ppo)  LOC18105441 (ppo)  LOC18105443 (ppo)  LOC18105446 (ppo)  LOC25479885 (mtr)  LOC25479887 (mtr)  LOC100793802 (gma)  LOC101255935 (sly)  LOC102666145 (gma)  LOC103848313 (bra)  LOC123108734 (tae)  LOC123119151 (tae)  LOC123119160 (tae)  LOC123404642 (hvu) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2,  cysk_nucl 2  (predict for NP_001327391.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_566325.1)
nucl 5,  chlo 2,  mito 1,  cyto 1,  cyto_mito 1,  golg_plas 1  (predict for NP_974252.1)
nucl 6,  mito 1,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for NP_974253.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327391.1)
other 8,  mito 3  (predict for NP_566325.1)
other 8,  mito 3  (predict for NP_974252.1)
other 8,  mito 3  (predict for NP_974253.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G07930 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AT5G15710 Galactose oxidase/kelch repeat superfamily protein [detail] 831425
5.4 AT3G29270 RING/U-box superfamily protein [detail] 822584
5.4 EMB1674 EMBRYO DEFECTIVE protein [detail] 28717376
Coexpressed
gene list		 [Coexpressed gene list for AT3G07930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258640_at
258640_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258640_at
258640_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258640_at
258640_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819984      
Refseq ID (protein) NP_001327391.1 
NP_566325.1 
NP_974252.1 
NP_974253.1 


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