[←][→] ath   AT3G09040 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA  
GO MF
KEGG
Protein NP_001319506.1  NP_001326907.1  NP_001326908.1  NP_187516.1 
BLAST NP_001319506.1  NP_001326907.1  NP_001326908.1  NP_187516.1 
Orthologous [Ortholog page] LOC4336394 (osa)  LOC7492447 (ppo)  LOC100257512 (vvi)  LOC100800995 (gma)  LOC103646227 (zma)  LOC103859314 (bra)  LOC112940021 (sly) 
Subcellular
localization
wolf
chlo 5,  vacu 3,  chlo_mito 3  (predict for NP_001319506.1)
chlo 4,  mito 3,  plas 1,  cyto_mito 1  (predict for NP_001326907.1)
chlo 4,  mito 3,  plas 1,  cyto_mito 1  (predict for NP_001326908.1)
chlo 5,  vacu 3,  chlo_mito 3  (predict for NP_187516.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001319506.1)
mito 7  (predict for NP_001326907.1)
mito 7  (predict for NP_001326908.1)
mito 6  (predict for NP_187516.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G09040 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824504
8.2 AT1G68930 pentatricopeptide (PPR) repeat-containing protein [detail] 843226
8.2 AT3G58590 Pentatricopeptide repeat (PPR) superfamily protein [detail] 825028
7.9 AT5G65570 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 836683
6.2 AT1G22830 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 838888
6.0 AT1G23450 PPR superfamily protein [detail] 838953
5.9 AT1G74350 Intron maturase, type II family protein [detail] 843776
5.7 AT4G21300 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827878
5.2 emb2739 embryo defective 2739 [detail] 827107
Coexpressed
gene list		 [Coexpressed gene list for AT3G09040]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259206_at
259206_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259206_at
259206_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259206_at
259206_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820057      
Refseq ID (protein) NP_001319506.1 
NP_001326907.1 
NP_001326908.1 
NP_187516.1 


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