[←][→] ath   AT3G09180 Gene
functional annotation
Function   mediator of RNA polymerase II transcription subunit  
GO BP
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001325464.1  NP_001325465.1  NP_566345.1 
BLAST NP_001325464.1  NP_001325465.1  NP_566345.1 
Orthologous [Ortholog page] LOC4326197 (osa)  LOC7488095 (ppo)  LOC25499482 (mtr)  LOC100193632 (zma)  LOC100258667 (vvi)  LOC100274560 (zma)  LOC100782776 (gma)  LOC100796886 (gma)  LOC101247160 (sly)  LOC103859315 (bra)  LOC103870565 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001325464.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_001325465.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_566345.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001325464.1)
other 4,  chlo 4  (predict for NP_001325465.1)
other 4,  chlo 4  (predict for NP_566345.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT3G09180 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 LFR ARM repeat superfamily protein [detail] 821873
6.1 SPL2 E3 Ubiquitin ligase family protein [detail] 841855
6.0 AT5G18420 CCR4-NOT transcription complex subunit [detail] 831960
5.5 OEP37 chloroplast outer envelope protein 37 [detail] 819000
5.2 LPPepsilon2 Phosphatidic acid phosphatase (PAP2) family protein [detail] 836777
5.0 PRA1.H prenylated RAB acceptor 1.H [detail] 828863
Coexpressed
gene list		 [Coexpressed gene list for AT3G09180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259212_at
259212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259212_at
259212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259212_at
259212_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820074      
Refseq ID (protein) NP_001325464.1 
NP_001325465.1 
NP_566345.1 


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