ATTED-II : GeneID search result

[←][→] ath AT3G09760 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO CC

GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0008270 [list] [network] zinc ion binding

(554 genes)

IEA

KEGG

Protein

NP_566355.1

BLAST

NP_566355.1

Orthologous

[Ortholog page] AT5G03180 (ath) AT5G60580 (ath) LOC7491134 (ppo) LOC11407485 (mtr) LOC11427758 (mtr) LOC25484020 (mtr) LOC100257089 (vvi) LOC100265508 (vvi) LOC100782610 (gma) LOC100783117 (gma) LOC100787963 (gma) LOC100788108 (gma) LOC100789854 (gma) LOC100811800 (gma) LOC100815566 (gma) LOC100815599 (gma) LOC101249200 (sly) LOC101256453 (sly) LOC101265737 (sly) LOC103845473 (bra) LOC103850479 (bra) LOC103851495 (bra) LOC103859282 (bra) LOC103870521 (bra) LOC103870523 (bra)

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_566355.1)

Subcellular
localization
TargetP

other 9

(predict for NP_566355.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G09760 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.2	AT5G58950	Protein kinase superfamily protein	[detail]	836012
5.5	AT4G27880	Protein with RING/U-box and TRAF-like domain	[detail]	828901
5.3	AT2G30160	Mitochondrial substrate carrier family protein	[detail]	817568
4.6	AT3G61160	Protein kinase superfamily protein	[detail]	825288

Coexpressed
gene list

[Coexpressed gene list for AT3G09760]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258718_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258718_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258718_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	820134
Refseq ID (protein)	NP_566355.1

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