[←][→] ath   AT3G09810 Gene
functional annotation
Function   isocitrate dehydrogenase VI  
GO BP
GO:0006102 [list] [network] isocitrate metabolic process  (12 genes)  IBA IGI  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IBA TAS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004449 [list] [network] isocitrate dehydrogenase (NAD+) activity  (6 genes)  IBA IGI  
GO:0051287 [list] [network] NAD binding  (66 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (115 genes)  IEA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_850549.1 
BLAST NP_850549.1 
Orthologous [Ortholog page] IDH-V (ath)  LOC4324442 (osa)  LOC11420892 (mtr)  LOC11434137 (mtr)  LOC100191841 (zma)  LOC100263635 (vvi)  LOC100283574 (zma)  LOC100781465 (gma)  LOC100811326 (gma)  LOC101246168 (sly)  LOC101246460 (sly)  LOC103847393 (bra)  LOC103850485 (bra)  LOC103855482 (bra)  LOC103870516 (bra) 
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_850549.1)
Subcellular
localization
TargetP
mito 6,  chlo 6  (predict for NP_850549.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 15
ath00020 Citrate cycle (TCA cycle) 11
ath01230 Biosynthesis of amino acids 7
ath00010 Glycolysis / Gluconeogenesis 5
ath01210 2-Oxocarboxylic acid metabolism 4
Genes directly connected with IDH-VI on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 IDH2 isocitrate dehydrogenase subunit 2 [detail] 816218
8.6 IDH-V isocitrate dehydrogenase V [detail] 831884
8.5 AT5G08300 Succinyl-CoA ligase, alpha subunit [detail] 830726
7.1 AT2G36580 Pyruvate kinase family protein [detail] 818231
6.8 PFK5 phosphofructokinase 5 [detail] 816781
Coexpressed
gene list		 [Coexpressed gene list for IDH-VI]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258655_at
258655_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258655_at
258655_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258655_at
258655_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820139      
Refseq ID (protein) NP_850549.1 


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