[←][→] ath   At3g09880 Gene
functional annotation
Function   Protein phosphatase 2A regulatory B subunit family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009554 [list] [network] megasporogenesis  (12 genes)  IGI  
GO:0051177 [list] [network] meiotic sister chromatid cohesion  (15 genes)  IGI  
GO:0009556 [list] [network] microsporogenesis  (26 genes)  IGI  
GO CC
GO:0000779 [list] [network] condensed chromosome, centromeric region  (12 genes)  IDA  
GO:0000159 [list] [network] protein phosphatase type 2A complex  (15 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (32 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_187599.1 
BLAST NP_187599.1 
Orthologous [Ortholog page] ATB' ALPHA (ath)  LOC4333730 (osa)  LOC7468800 (ppo)  LOC18100135 (ppo)  LOC25483949 (mtr)  LOC25485546 (mtr)  LOC25499334 (mtr)  LOC100788774 (gma)  LOC100795277 (gma)  LOC100798308 (gma)  LOC100798842 (gma)  LOC100814538 (gma)  LOC101257402 (sly)  LOC101264630 (sly)  LOC101268818 (sly)  LOC103850499 (bra)  LOC103859278 (bra)  LOC103870509 (bra)  LOC123087278 (tae)  LOC123090678 (tae)  LOC123095691 (tae)  LOC123447132 (hvu) 
Subcellular
localization
wolf
mito 3,  nucl 3,  cyto_mito 2,  nucl_plas 2,  plas 1  (predict for NP_187599.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for NP_187599.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with ATB' BETA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 BPM2 BTB-POZ and MATH domain 2 [detail] 819793
7.1 RCY1 arginine-rich cyclin 1 [detail] 817183
7.0 ATU2AF35A U2 snRNP auxiliary factor small subunit [detail] 839657
5.8 AT2G01480 O-fucosyltransferase family protein [detail] 814676
5.4 AT3G02750 Protein phosphatase 2C family protein [detail] 820909
Coexpressed
gene list		 [Coexpressed gene list for ATB' BETA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258659_at
258659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258659_at
258659_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258659_at
258659_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820146      
Refseq ID (protein) NP_187599.1 


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