[][] ath   AT3G10040 Gene
functional annotation
Function   sequence-specific DNA binding transcription factor
GO BP
GO:1900037 [list] [network] regulation of cellular response to hypoxia  (3 genes)  IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0010629 [list] [network] negative regulation of gene expression  (539 genes)  IEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_187615.2 
BLAST NP_187615.2 
Orthologous [Ortholog page] SHOOT2 (gma)LOC4327270 (osa)LOC11425464 (mtr)LOC25499370 (mtr)LOC100259589 (vvi)LOC100808934 (gma)LOC100816661 (gma)LOC101248512 (sly)LOC103635104 (zma)LOC103650125 (zma)LOC103859272 (bra)LOC103870494 (bra)
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_187615.2)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for NP_187615.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00430 Taurine and hypotaurine metabolism 2
ath00010 Glycolysis / Gluconeogenesis 2
Genes directly connected with AT3G10040 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
18.1 AT3G27220 Galactose oxidase/kelch repeat superfamily protein [detail] 822341
16.7 LBD41 LOB domain-containing protein 41 [detail] 821112
15.9 AT5G15120 2-aminoethanethiol dioxygenase, putative (DUF1637) [detail] 831364
14.4 AT5G39890 2-aminoethanethiol dioxygenase, putative (DUF1637) [detail] 833986
10.0 AT4G24110 NADP-specific glutamate dehydrogenase [detail] 828511
9.4 AT1G33055 hypothetical protein [detail] 840201
5.9 PFK6 phosphofructokinase 6 [detail] 829420
4.7 bHLH093 beta HLH protein 93 [detail] 836690
3.7 AUF2 F-box family protein [detail] 838827
Coexpressed
gene list
[Coexpressed gene list for AT3G10040]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258930_at
258930_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258930_at
258930_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258930_at
258930_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 820165    
Refseq ID (protein) NP_187615.2 


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