[←][→] ath   At3g11460 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (15 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_187753.1 
BLAST NP_187753.1 
Orthologous [Ortholog page] LOC4327605 (osa)  LOC7491935 (ppo)  LOC25483809 (mtr)  LOC100789146 (gma)  LOC101250917 (sly)  LOC103870345 (bra)  LOC123062434 (tae)  LOC123079571 (tae)  LOC123444717 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1,  vacu 1,  pero 1  (predict for NP_187753.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_187753.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G11460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.3 AT5G66500 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 836782
12.7 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824504
12.2 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835362
11.4 AT4G18840 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 827618
11.1 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837325
11.0 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 831503
10.9 MEF7 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830856
10.8 AT3G24000 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821984
10.6 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 818003
10.3 AT3G22450 Ribosomal L18p/L5e family protein [detail] 821816
9.7 AT1G07740 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837288
9.5 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 837156
9.4 AT4G14820 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827139
9.4 PDE247 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837083
9.3 AT2G03380 Pentatricopeptide repeat (PPR) superfamily protein [detail] 814867
9.1 PGN Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 842111
8.8 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827057
8.8 AT1G28690 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839769
7.1 CRR22 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837671
6.7 AT2G41080 pentatricopeptide (PPR) repeat protein [detail] 818707
6.3 RUS1 root UVB sensitive-like protein (Protein of unknown function, DUF647) [detail] 823732
Coexpressed
gene list		 [Coexpressed gene list for AT3G11460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259285_at
259285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259285_at
259285_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259285_at
259285_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820319      
Refseq ID (protein) NP_187753.1 


The preparation time of this page was 0.5 [sec].