[←][→] ath   AT3G11530 Gene
functional annotation
Function   Vacuolar protein sorting 55 (VPS55) family protein  
GO BP
GO:2000009 [list] [network] negative regulation of protein localization to cell surface  (2 genes)  IBA  
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway  (9 genes)  IBA  
GO CC
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO MF
KEGG
Protein NP_001325456.1  NP_566391.1  NP_974285.2 
BLAST NP_001325456.1  NP_566391.1  NP_974285.2 
Orthologous [Ortholog page] LOC4324475 (osa)  LOC7466022 (ppo)  LOC25499408 (mtr)  LOC100249425 (vvi)  LOC100282432 (zma)  LOC100306519 (gma)  LOC100800586 (gma)  LOC101245787 (sly)  LOC103859395 (bra)  LOC103870336 (bra) 
Subcellular
localization
wolf
plas 4,  extr 3,  vacu 3  (predict for NP_001325456.1)
vacu 7,  plas 1,  extr 1  (predict for NP_566391.1)
vacu 7,  plas 1,  extr 1  (predict for NP_974285.2)
Subcellular
localization
TargetP
scret 4  (predict for NP_001325456.1)
scret 9  (predict for NP_566391.1)
scret 9  (predict for NP_974285.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G11530 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 AT2G28370 Uncharacterized protein family (UPF0497) [detail] 817385
6.7 RPL18AA 60S ribosomal protein L18A-1 [detail] 839876
6.6 AT1G78895 Reticulon family protein [detail] 844227
5.7 AT3G56820 RmlC-type cupin [detail] 824849
5.3 AT5G64880 transmembrane protein [detail] 836611
4.4 AT5G24170 Got1/Sft2-like vescicle transport protein family [detail] 832484
3.7 AT4G11211 hypothetical protein [detail] 2745699
Coexpressed
gene list		 [Coexpressed gene list for AT3G11530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259236_at
259236_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259236_at
259236_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259236_at
259236_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820326      
Refseq ID (protein) NP_001325456.1 
NP_566391.1 
NP_974285.2 


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