[←][→] ath   At3g11710 Gene
functional annotation
Function   lysyl-tRNA synthetase 1      
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004824 [list] [network] lysine-tRNA ligase activity  (1 genes)  IDA  
KEGG ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (199 genes)
Protein NP_187777.1 
BLAST NP_187777.1 
Orthologous [Ortholog page] LysRS (sly)  LOC4333345 (osa)  LOC7488956 (ppo)  LOC11443601 (mtr)  LOC18100479 (ppo)  LOC18107759 (ppo)  LOC100785660 (gma)  LOC100789811 (gma)  LOC100809106 (gma)  LOC101251001 (sly)  LOC103846034 (bra)  LOC103846983 (bra)  LOC103859404 (bra)  LOC123095773 (tae)  LOC123105426 (tae)  LOC123113696 (tae)  LOC123123224 (tae)  LOC123447250 (hvu)  LOC123452731 (hvu) 
Subcellular
localization
wolf
cyto 7,  nucl 1,  chlo 1,  plas 1,  cysk_nucl 1  (predict for NP_187777.1)
Subcellular
localization
TargetP
other 7  (predict for NP_187777.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 8
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with ATKRS-1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 ATG2 metallopeptidase M24 family protein [detail] 824343
10.2 AT5G27470 seryl-tRNA synthetase / serine-tRNA ligase [detail] 832806
9.4 AT1G29880 glycyl-tRNA synthetase / glycine-tRNA ligase [detail] 839866
9.2 AT5G26830 Threonyl-tRNA synthetase [detail] 832741
9.0 AT2G40660 Nucleic acid-binding, OB-fold-like protein [detail] 818661
8.9 OVA9 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS [detail] 839120
Coexpressed
gene list		 [Coexpressed gene list for ATKRS-1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259069_at
259069_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259069_at
259069_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259069_at
259069_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820343      
Refseq ID (protein) NP_187777.1 


The preparation time of this page was 0.1 [sec].