[←][→] ath   AT3G11840 Gene
functional annotation
Function   E3 ubiquitin-protein ligase PUB24-like protein  
GO BP
GO:0002679 [list] [network] respiratory burst involved in defense response  (5 genes)  IGI  
GO:0051865 [list] [network] protein autoubiquitination  (17 genes)  IDA  
GO:0010200 [list] [network] response to chitin  (142 genes)  IEP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
KEGG
Protein NP_566402.2 
BLAST NP_566402.2 
Orthologous [Ortholog page] LOC7469945 (ppo)  LOC7491122 (ppo)  LOC25483691 (mtr)  LOC25492197 (mtr)  LOC100261566 (vvi)  LOC100262692 (vvi)  LOC100778547 (gma)  LOC100787419 (gma)  LOC100787426 (gma)  LOC100798446 (gma)  LOC100811293 (gma)  LOC101247100 (sly)  LOC101249004 (sly)  LOC101256004 (sly)  LOC101262343 (sly)  LOC103845959 (bra)  LOC103859413 (bra)  LOC103870305 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  extr 1,  golg 1  (predict for NP_566402.2)
Subcellular
localization
TargetP
other 9  (predict for NP_566402.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB24 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 EDA39 calmodulin-binding family protein [detail] 829442
7.7 AT1G16670 Protein kinase superfamily protein [detail] 838236
7.4 CNI1 carbon/nitrogen insensitive 1 [detail] 832801
7.3 AT5G39020 Malectin/receptor-like protein kinase family protein [detail] 833894
5.7 AT3G09010 Protein kinase superfamily protein [detail] 820053
5.1 AT4G29050 Concanavalin A-like lectin protein kinase family protein [detail] 829026
4.9 AT4G22980 molybdenum cofactor sulfurase-like protein [detail] 828397
3.8 AT4G39580 Galactose oxidase/kelch repeat superfamily protein [detail] 830112
Coexpressed
gene list		 [Coexpressed gene list for PUB24]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258787_at
258787_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258787_at
258787_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258787_at
258787_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820357      
Refseq ID (protein) NP_566402.2 


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