[←][→] ath   At3g12260 Gene
functional annotation
Function   LYR family of Fe/S cluster biogenesis protein  
GO BP
GO CC
GO:0005747 [list] [network] mitochondrial respiratory chain complex I  (56 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO MF
KEGG ath00190 [list] [network] Oxidative phosphorylation (170 genes)
Protein NP_566416.1 
BLAST NP_566416.1 
Orthologous [Ortholog page] LOC4344058 (osa)  LOC11446007 (mtr)  LOC18094349 (ppo)  LOC100791392 (gma)  LOC100814371 (gma)  LOC101251020 (sly)  LOC103845648 (bra)  LOC103859436 (bra)  LOC103870262 (bra)  LOC123044029 (tae)  LOC123051906 (tae)  LOC123187788 (tae)  LOC123425075 (hvu) 
Subcellular
localization
wolf
mito 4,  cyto 4,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_566416.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_566416.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
Genes directly connected with AT3G12260 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.0 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit [detail] 829382
11.6 AT4G20150 excitatory amino acid transporter [detail] 827761
11.2 CIB22 LYR family of Fe/S cluster biogenesis protein [detail] 829622
8.2 TO1 thioredoxin O1 [detail] 818065
7.0 SPR1 spiral1 [detail] 814896
6.2 DAD2 Defender against death (DAD family) protein [detail] 818117
4.7 AT1G01630 Sec14p-like phosphatidylinositol transfer family protein [detail] 839231
Coexpressed
gene list		 [Coexpressed gene list for AT3G12260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256267_at
256267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256267_at
256267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256267_at
256267_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820406      
Refseq ID (protein) NP_566416.1 


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