[←][→] ath   At3g12280 Gene
functional annotation
Function   retinoblastoma-related 1      
GO BP
GO:0022619 [list] [network] generative cell differentiation  (1 genes)  IMP  
GO:0010377 [list] [network] guard cell fate commitment  (2 genes)  IGI  
GO:1903866 [list] [network] palisade mesophyll development  (2 genes)  IMP  
GO:0000082 [list] [network] G1/S transition of mitotic cell cycle  (3 genes)  IMP TAS  
GO:2000653 [list] [network] regulation of genetic imprinting  (3 genes)  IDA  
GO:2000036 [list] [network] regulation of stem cell population maintenance  (4 genes)  IMP  
GO:0006349 [list] [network] regulation of gene expression by genomic imprinting  (15 genes)  IPI  
GO:0051783 [list] [network] regulation of nuclear division  (19 genes)  IMP  
GO:0008356 [list] [network] asymmetric cell division  (24 genes)  IGI IMP  
GO:0007129 [list] [network] homologous chromosome pairing at meiosis  (29 genes)  IMP  
GO:0001708 [list] [network] cell fate specification  (34 genes)  IMP  
GO:0009960 [list] [network] endosperm development  (37 genes)  IMP  
GO:0032875 [list] [network] regulation of DNA endoreduplication  (38 genes)  IMP  
GO:0009567 [list] [network] double fertilization forming a zygote and endosperm  (40 genes)  IEP  
GO:0010090 [list] [network] trichome morphogenesis  (66 genes)  IMP  
GO:0001558 [list] [network] regulation of cell growth  (132 genes)  IMP  
GO:0051726 [list] [network] regulation of cell cycle  (158 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO:0048229 [list] [network] gametophyte development  (523 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IMP  
GO CC
GO:0070176 [list] [network] DRM complex  (15 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0008134 [list] [network] transcription factor binding  (27 genes)  TAS  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189868.1  NP_566417.3 
BLAST NP_001189868.1  NP_566417.3 
Orthologous [Ortholog page] LOC4346176 (osa)  LOC7455806 (ppo)  LOC11429529 (mtr)  LOC100137000 (tae)  LOC100777429 (gma)  LOC100777805 (gma)  LOC100779266 (gma)  RBR1 (sly)  LOC103249150 (bra)  LOC103859438 (bra)  LOC103870260 (bra)  LOC123152064 (tae)  LOC123165294 (tae)  LOC123407429 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  nucl_plas 2,  E.R. 1,  cyto_plas 1  (predict for NP_001189868.1)
nucl 4,  cyto 2,  nucl_plas 2,  E.R. 1,  cyto_plas 1  (predict for NP_566417.3)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001189868.1)
other 8,  chlo 3  (predict for NP_566417.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
Genes directly connected with RBR1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 RNR1 ribonucleotide reductase 1 [detail] 816715
7.9 POLA2 DNA polymerase alpha 2 [detail] 843086
7.4 MCM5 Minichromosome maintenance (MCM2/3/5) family protein [detail] 815415
7.1 AT3G21480 BRCT domain-containing DNA repair protein [detail] 821702
Coexpressed
gene list		 [Coexpressed gene list for RBR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256268_at
256268_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256268_at
256268_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256268_at
256268_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820408      
Refseq ID (protein) NP_001189868.1 
NP_566417.3 


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