[←][→] ath   At3g12560 Gene
functional annotation
Function   TRF-like 9      
GO BP
GO:0090558 [list] [network] plant epidermis development  (635 genes)  IEA  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008301 [list] [network] DNA binding, bending  (2 genes)  IDA  
GO:0042162 [list] [network] telomeric DNA binding  (13 genes)  IDA  
KEGG
Protein NP_001327482.1  NP_187862.1 
BLAST NP_001327482.1  NP_187862.1 
Orthologous [Ortholog page] TRFL1 (ath)  TBP1 (ath)  TRFL2 (ath)  LOC4332403 (osa)  LOC7458136 (ppo)  LOC7465106 (ppo)  LOC7467553 (ppo)  LOC7488113 (ppo)  LOC11417600 (mtr)  LOC11436475 (mtr)  LOC25489316 (mtr)  TBP1 (sly)  LOC100780881 (gma)  LOC100792533 (gma)  LOC100795471 (gma)  LOC100797436 (gma)  LOC100814318 (gma)  LOC100816121 (gma)  LOC101246932 (sly)  LOC101255102 (sly)  LOC101255981 (sly)  LOC103836437 (bra)  LOC103843940 (bra)  LOC103845457 (bra)  LOC103846538 (bra)  LOC103850900 (bra)  LOC103856034 (bra)  LOC103870245 (bra)  LOC123085443 (tae)  LOC123092603 (tae)  LOC123097910 (tae)  LOC123449022 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001327482.1)
nucl 6,  chlo 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_187862.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001327482.1)
other 3  (predict for NP_187862.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRFL9 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 AT1G33360 ATP-dependent Clp protease [detail] 840230
6.1 AT1G74510 Galactose oxidase/kelch repeat superfamily protein [detail] 843792
5.8 TRFL1 TRF-like 1 [detail] 823812
5.7 KRP2 KIP-related protein 2 [detail] 824226
4.6 ARF16 auxin response factor 16 [detail] 829131
Coexpressed
gene list		 [Coexpressed gene list for TRFL9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256281_at
256281_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256281_at
256281_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256281_at
256281_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820436      
Refseq ID (protein) NP_001327482.1 
NP_187862.1 


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