[←][→] ath   At3g12640 Gene
functional annotation
Function   RNA binding (RRM/RBD/RNP motifs) family protein      
GO BP
GO:1900364 [list] [network] negative regulation of mRNA polyadenylation  (2 genes)  IEA  
GO:0043488 [list] [network] regulation of mRNA stability  (26 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (183 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001325953.1  NP_001325954.1  NP_001325955.1  NP_566430.3 
BLAST NP_001325953.1  NP_001325954.1  NP_001325955.1  NP_566430.3 
Orthologous [Ortholog page] LOC4345972 (osa)  LOC7480090 (ppo)  LOC7482274 (ppo)  LOC9266635 (osa)  LOC11425456 (mtr)  LOC11446344 (mtr)  LOC100787464 (gma)  LOC100817963 (gma)  LOC101267843 (sly)  LOC103845348 (bra)  LOC103859459 (bra)  LOC123045736 (tae)  LOC123053602 (tae)  LOC123151170 (tae)  LOC123155540 (tae)  LOC123163778 (tae)  LOC123189503 (tae)  LOC123412421 (hvu)  LOC123426982 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001325953.1)
nucl 10  (predict for NP_001325954.1)
nucl 10  (predict for NP_001325955.1)
nucl 9  (predict for NP_566430.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001325953.1)
other 9  (predict for NP_001325954.1)
other 9  (predict for NP_001325955.1)
other 9  (predict for NP_566430.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with AT3G12640 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 AT1G56290 CwfJ-like family protein [detail] 842082
6.6 AT3G17712 uncharacterized protein [detail] 7922332
6.6 DOT2 SART-1 family [detail] 831541
6.4 AT5G66810 Ran-binding protein in the microtubule-organising centre protein [detail] 836814
5.5 MEF8S Pentatricopeptide repeat (PPR) superfamily protein [detail] 829380
Coexpressed
gene list		 [Coexpressed gene list for AT3G12640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257703_at
257703_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257703_at
257703_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257703_at
257703_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820444      
Refseq ID (protein) NP_001325953.1 
NP_001325954.1 
NP_001325955.1 
NP_566430.3 


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