[←][→] ath   At3g13290 Gene
functional annotation
Function   varicose-like protein      
GO BP
GO:0031087 [list] [network] deadenylation-independent decapping of nuclear-transcribed mRNA  (7 genes)  ISS  
GO:0007186 [list] [network] G protein-coupled receptor signaling pathway  (20 genes)  ISS  
GO:0006402 [list] [network] mRNA catabolic process  (36 genes)  ISS  
GO CC
GO:0000932 [list] [network] P-body  (32 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_187937.2 
BLAST NP_187937.2 
Orthologous [Ortholog page] VCS (ath)  LOC4330568 (osa)  LOC4340825 (osa)  LOC7458458 (ppo)  LOC7471701 (ppo)  LOC11411068 (mtr)  LOC11444866 (mtr)  LOC18103544 (ppo)  LOC18105985 (ppo)  LOC100777151 (gma)  LOC100778070 (gma)  LOC100797699 (gma)  LOC100798228 (gma)  LOC100802374 (gma)  LOC101249682 (sly)  LOC101268011 (sly)  LOC103870186 (bra)  LOC117125612 (bra)  LOC123128239 (tae)  LOC123139392 (tae)  LOC123145337 (tae)  LOC123150436 (tae)  LOC123161227 (tae)  LOC123166762 (tae)  LOC123404134 (hvu)  LOC123412041 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 5  (predict for NP_187937.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_187937.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03018 RNA degradation 2
Genes directly connected with VCR on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 EDA10 SEC7-like guanine nucleotide exchange family protein [detail] 839301
7.9 SUS2 Pre-mRNA-processing-splicing factor [detail] 844347
7.7 GCT RNA polymerase II transcription mediator [detail] 841978
6.9 AT3G13990 dentin sialophosphoprotein, putative (DUF1296) [detail] 820613
Coexpressed
gene list		 [Coexpressed gene list for VCR]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 820529      
Refseq ID (protein) NP_187937.2 


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