[←][→] ath   AT3G13290 Gene
functional annotation
Function   varicose-like protein  
GO BP
GO:0031087 [list] [network] deadenylation-independent decapping of nuclear-transcribed mRNA  (6 genes)  IBA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  ISS  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_187937.2 
BLAST NP_187937.2 
Orthologous [Ortholog page] VCS (ath)  LOC4330568 (osa)  LOC4340825 (osa)  LOC7458458 (ppo)  LOC7471701 (ppo)  LOC11411068 (mtr)  LOC11444866 (mtr)  LOC100241190 (vvi)  LOC100259985 (vvi)  LOC100777151 (gma)  LOC100778070 (gma)  LOC100798228 (gma)  LOC100802374 (gma)  LOC101249682 (sly)  LOC101268011 (sly)  LOC103627664 (zma)  LOC103654004 (zma)  LOC103870186 (bra)  LOC104878634 (vvi) 
Subcellular
localization
wolf
chlo 5,  nucl 5  (predict for NP_187937.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_187937.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03040 Spliceosome 3
Genes directly connected with VCR on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT3G13990 dentin sialophosphoprotein, putative (DUF1296) [detail] 820613
8.6 SUS2 Pre-mRNA-processing-splicing factor [detail] 844347
8.2 EMB2016 embryo defective 2016 [detail] 819736
5.8 AT4G12640 RNA recognition motif (RRM)-containing protein [detail] 826877
Coexpressed
gene list		 [Coexpressed gene list for VCR]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 820529      
Refseq ID (protein) NP_187937.2 


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