[←][→] ath   AT3G13340 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001189878.1  NP_001319539.1  NP_566453.1 
BLAST NP_001189878.1  NP_001319539.1  NP_566453.1 
Orthologous [Ortholog page] AT5G56190 (ath)  AT1G36070 (ath)  AT1G55680 (ath)  AT1G78070 (ath)  LOC4330559 (osa)  LOC4332995 (osa)  LOC4345539 (osa)  LOC7471712 (ppo)  LOC7489180 (ppo)  LOC11407503 (mtr)  LOC11416312 (mtr)  LOC25489425 (mtr)  LOC100249746 (vvi)  LOC100267825 (vvi)  LOC100274157 (zma)  LOC100274637 (zma)  LOC100280227 (zma)  LOC100775453 (gma)  LOC100788712 (gma)  LOC100791929 (gma)  LOC100792497 (gma)  LOC100802991 (gma)  LOC100808557 (gma)  LOC100817036 (gma)  LOC100853325 (vvi)  LOC100853597 (vvi)  LOC101249070 (sly)  LOC101253942 (sly)  LOC103638309 (zma)  LOC103832232 (bra)  LOC103832565 (bra)  LOC103834840 (bra)  LOC103845056 (bra)  LOC103851842 (bra)  LOC103859511 (bra)  LOC103870182 (bra)  LOC103871026 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  pero 1  (predict for NP_001189878.1)
nucl 6,  chlo 1,  pero 1  (predict for NP_001319539.1)
nucl 6,  chlo 1,  pero 1  (predict for NP_566453.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189878.1)
other 9  (predict for NP_001319539.1)
other 9  (predict for NP_566453.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G13340 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT3G58030 RING/U-box superfamily protein [detail] 824972
6.1 AT3G24740 cellulose synthase, putative (DUF1644) [detail] 822072
6.1 MOS11 Protein MODIFIER OF SNC1 11 [detail] 831253
5.6 AT1G55680 Transducin/WD40 repeat-like superfamily protein [detail] 842017
Coexpressed
gene list		 [Coexpressed gene list for AT3G13340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257661_at
257661_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257661_at
257661_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257661_at
257661_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820534      
Refseq ID (protein) NP_001189878.1 
NP_001319539.1 
NP_566453.1 


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