[←][→] ath   At3g13940 Gene
functional annotation
Function   DNA binding / DNA-directed RNA polymerase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (52 genes)
Protein NP_188010.1 
BLAST NP_188010.1 
Orthologous [Ortholog page] LOC4350918 (osa)  LOC11433564 (mtr)  LOC11441148 (mtr)  LOC18094841 (ppo)  LOC100812427 (gma)  LOC101267531 (sly)  LOC103842476 (bra)  LOC123086023 (tae)  LOC123092055 (tae)  LOC123097274 (tae)  LOC123448414 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_188010.1)
Subcellular
localization
TargetP
other 9  (predict for NP_188010.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT3G13940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.6 AT1G04945 HIT-type Zinc finger family protein [detail] 5007664
11.3 AT3G10530 Transducin/WD40 repeat-like superfamily protein [detail] 820218
10.8 AT5G38720 ribosomal RNA-processing 7 protein [detail] 833863
Coexpressed
gene list		 [Coexpressed gene list for AT3G13940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258202_at
258202_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258202_at
258202_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258202_at
258202_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820607      
Refseq ID (protein) NP_188010.1 


The preparation time of this page was 1.0 [sec].