| functional annotation |
| Function |
SPA1-related 3 |
|
| GO BP |
|
GO:0042752 [list] [network] regulation of circadian rhythm
|
(61 genes)
|
IEA
|
 |
|
GO:0009640 [list] [network] photomorphogenesis
|
(80 genes)
|
IEA
|
|
|
GO:0071482 [list] [network] cellular response to light stimulus
|
(146 genes)
|
IEA
|
|
|
GO:0009658 [list] [network] chloroplast organization
|
(209 genes)
|
IEA
|
|
|
GO:0009639 [list] [network] response to red or far red light
|
(365 genes)
|
IEA
|
|
|
GO:0006468 [list] [network] protein phosphorylation
|
(639 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex
|
(121 genes)
|
ISS
|
|
|
GO:0005634 [list] [network] nucleus
|
(10305 genes)
|
ISM
|
|
|
| GO MF |
|
GO:0005524 [list] [network] ATP binding
|
(253 genes)
|
IEA
|
|
|
GO:0042802 [list] [network] identical protein binding
|
(404 genes)
|
IPI
|
|
|
GO:0004672 [list] [network] protein kinase activity
|
(768 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001327621.1
NP_001327622.1
NP_001327623.1
NP_001327624.1
NP_683567.1
|
| BLAST |
NP_001327621.1
NP_001327622.1
NP_001327623.1
NP_001327624.1
NP_683567.1
|
| Orthologous |
[Ortholog page]
SPA4 (ath)
LOC4324727 (osa)
LOC7460821 (ppo)
LOC11411033 (mtr)
LOC18095578 (ppo)
LOC100784064 (gma)
LOC100809718 (gma)
LOC100811457 (gma)
LOC100813635 (gma)
LOC101249991 (sly)
LOC101256107 (sly)
LOC103840863 (bra)
LOC103868459 (bra)
LOC103869936 (bra)
LOC123062017 (tae)
LOC123070723 (tae)
LOC123079128 (tae)
LOC123444323 (hvu)
|
Subcellular
localization
wolf |
|
nucl 5,
chlo 1,
mito 1,
cysk 1,
chlo_mito 1
|
(predict for NP_001327621.1)
|
|
nucl 5,
chlo 1,
mito 1,
cysk 1,
chlo_mito 1
|
(predict for NP_001327622.1)
|
|
nucl 5,
cyto 1,
cysk 1,
plas 1,
golg_plas 1
|
(predict for NP_001327623.1)
|
|
nucl 6,
cysk 2,
chlo 1
|
(predict for NP_001327624.1)
|
|
nucl 6,
cysk 2,
chlo 1
|
(predict for NP_683567.1)
|
|
Subcellular
localization
TargetP |
|
mito 3
|
(predict for NP_001327621.1)
|
|
mito 3
|
(predict for NP_001327622.1)
|
|
chlo 7,
other 4
|
(predict for NP_001327623.1)
|
|
chlo 7,
other 4
|
(predict for NP_001327624.1)
|
|
chlo 7,
other 4
|
(predict for NP_683567.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04712 |
Circadian rhythm - plant |
2 |
 |
Genes directly connected with SPA3 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 10.1 |
SPA4 |
SPA1-related 4 |
[detail] |
841743 |
| 9.3 |
AT5G02830 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
831772 |
| 8.1 |
VTC2 |
GDP-L-galactose phosphorylase 1 |
[detail] |
828792 |
| 7.2 |
ZFN1 |
zinc finger protein 1 |
[detail] |
821230 |
|
Coexpressed
gene list |
[Coexpressed gene list for SPA3]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
At3g15354 Gene
